BBa_K273006
1
kivd
α-ketoisovalerate decarboxylase (kivd) from <i>Lactococcus lactis</i> | codon optimized
2009-10-15T11:00:00Z
2015-05-08T01:11:44Z
Designed by the Uppsala iGEM Team 2009. Synthesized by Bioneer (www.bioneer.com)
α-ketoisovalerate decarboxylase (kivd) originally sequence from <i>Lactococcus lactis</i>. Codon optimized for use in <i>Synechocystis</i> and <i>E. coli</i>.
false
false
_373_
0
5250
9
It's complicated
true
The sequence was codon optimized using this [http://2009.igem.org/wiki/images/d/df/Codon_usage.txt codon-usage table]
false
Karl Brune
annotation2047066
1
startcodon
range2047066
1
1
3
annotation2047067
1
cds kivd_opt
range2047067
1
1
1644
annotation2047068
1
stopcodon
range2047068
1
1645
1650
BBa_B0034
1
BBa_B0034
RBS (Elowitz 1999) -- defines RBS efficiency
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
RBS based on Elowitz repressilator.
false
true
_1_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS.
Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation23325
1
conserved
range23325
1
5
8
BBa_K273008
1
BBa_K273008
RBS - α-ketoisovalerate decarboxylase (kivd) from Lactococcus lactis | codon optimized
2009-10-15T11:00:00Z
2015-05-08T01:11:44Z
Assembled by the Uppsala iGEM Team 2009
Intermediate construct for butanol production of RBS (B0034) and codon-omptimized α-ketoisovalerate decarboxylase (kivd) from <i>Lactococcus lactis</i>.
false
false
_373_
0
5250
9
Not in stock
false
-
false
Karl Brune
component2047105
1
BBa_B0034
component2047109
1
BBa_K273006
annotation2047105
1
BBa_B0034
range2047105
1
1
12
annotation2047109
1
BBa_K273006
range2047109
1
19
1668
BBa_K273006_sequence
1
atgtatactgttggtgattatctgttggaccgtctgcatgagctgggcattgaagaaatctttggtgtgccgggtgattacaatctgcaatttctggatcagattatcagtcataaagatatgaaatgggtgggcaacgcgaacgaactgaacgcgagctacatggccgatggttatgcgcgcactaagaaagccgcggccttcctgaccacctttggtgtgggtgaactgagcgccgtgaatggcctggcgggtagctacgccgaaaatctgcccgtggtggaaatcgtgggcagcccgactagcaaggttcagaacgaaggcaagttcgttcatcataccctggccgacggcgatttcaaacactttatgaaaatgcacgaacccgttactgcggcgcgtactctgttgaccgcggagaacgccaccgtggaaatcgatcgtgttctgagcgccctgttgaaagagcgcaagcccgtgtatatcaatctgccggttgatgttgccgcggccaaagcggaaaaaccgagtctgcccctgaaaaaggaaaatagtaccagtaataccagcgatcaggagatcctgaacaagatccaggaaagcctgaaaaatgccaagaaaccgatcgtgattactggccatgagattattagtttcggtctggagaaaaccgtgacccaattcattagcaaaaccaaactgcccattaccaccctgaacttcggtaaaagcagcgttgatgaggcgctgccgagctttctgggcatttacaatggtaccctgagcgaacccaacctgaaagagtttgttgaaagtgcggatttcattctgatgctgggtgttaaactgaccgatagtagtaccggcgccttcactcatcatctgaatgaaaataagatgatcagtctgaacattgatgaaggcaagattttcaacgaacgtatccaaaactttgattttgagagtctgatcagtagtctgttggacctgagcgagattgaatacaagggcaagtacattgacaagaagcaagaagatttcgttccgagtaatgccctgttgagtcaagatcgcctgtggcaagcggtggaaaatctgacccaaagcaacgaaaccattgtggccgaacagggcaccagctttttcggtgccagtagtatttttctgaaaagtaagagccacttcatcggtcaaccgctgtggggcagcattggctatacttttccggccgccctgggcagccaaatcgccgataaagaaagccgccatctgttgtttattggtgatggcagcctgcaactgaccgttcaagagctgggcctggccattcgtgagaagattaatccgatttgtttcattatcaacaacgatggctatactgttgaacgtgagattcatggtccgaaccagagttataatgacattccgatgtggaactacagcaagctgccggaaagcttcggcgccaccgaagatcgcgtggtgagtaagattgtgcgtactgagaacgagttcgttagtgtgatgaaagaggcgcaagccgatccgaatcgtatgtattggattgagctgattctggcgaaagagggtgcgccgaaggttctgaaaaagatgggtaaactgtttgcggagcagaacaaaagttaataa
BBa_B0034_sequence
1
aaagaggagaaa
BBa_K273008_sequence
1
aaagaggagaaatactagatgtatactgttggtgattatctgttggaccgtctgcatgagctgggcattgaagaaatctttggtgtgccgggtgattacaatctgcaatttctggatcagattatcagtcataaagatatgaaatgggtgggcaacgcgaacgaactgaacgcgagctacatggccgatggttatgcgcgcactaagaaagccgcggccttcctgaccacctttggtgtgggtgaactgagcgccgtgaatggcctggcgggtagctacgccgaaaatctgcccgtggtggaaatcgtgggcagcccgactagcaaggttcagaacgaaggcaagttcgttcatcataccctggccgacggcgatttcaaacactttatgaaaatgcacgaacccgttactgcggcgcgtactctgttgaccgcggagaacgccaccgtggaaatcgatcgtgttctgagcgccctgttgaaagagcgcaagcccgtgtatatcaatctgccggttgatgttgccgcggccaaagcggaaaaaccgagtctgcccctgaaaaaggaaaatagtaccagtaataccagcgatcaggagatcctgaacaagatccaggaaagcctgaaaaatgccaagaaaccgatcgtgattactggccatgagattattagtttcggtctggagaaaaccgtgacccaattcattagcaaaaccaaactgcccattaccaccctgaacttcggtaaaagcagcgttgatgaggcgctgccgagctttctgggcatttacaatggtaccctgagcgaacccaacctgaaagagtttgttgaaagtgcggatttcattctgatgctgggtgttaaactgaccgatagtagtaccggcgccttcactcatcatctgaatgaaaataagatgatcagtctgaacattgatgaaggcaagattttcaacgaacgtatccaaaactttgattttgagagtctgatcagtagtctgttggacctgagcgagattgaatacaagggcaagtacattgacaagaagcaagaagatttcgttccgagtaatgccctgttgagtcaagatcgcctgtggcaagcggtggaaaatctgacccaaagcaacgaaaccattgtggccgaacagggcaccagctttttcggtgccagtagtatttttctgaaaagtaagagccacttcatcggtcaaccgctgtggggcagcattggctatacttttccggccgccctgggcagccaaatcgccgataaagaaagccgccatctgttgtttattggtgatggcagcctgcaactgaccgttcaagagctgggcctggccattcgtgagaagattaatccgatttgtttcattatcaacaacgatggctatactgttgaacgtgagattcatggtccgaaccagagttataatgacattccgatgtggaactacagcaagctgccggaaagcttcggcgccaccgaagatcgcgtggtgagtaagattgtgcgtactgagaacgagttcgttagtgtgatgaaagaggcgcaagccgatccgaatcgtatgtattggattgagctgattctggcgaaagagggtgcgccgaaggttctgaaaaagatgggtaaactgtttgcggagcagaacaaaagttaataa
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z