BBa_J61001
1
R6K
[R6K] Origin of replication
2006-07-30T11:00:00Z
2015-08-31T02:02:59Z
<tt>
PCR ca1011F/R on pG80ko (445 bp, EcoRI/SpeI)<br>
Sub into pSB1A2-I13522 (EcoRI/SpeI)<br>
Product is Bca1011<br>
----
ca1011F Forward Biobricking of R6K<br>
GGACTgaattcgcggccgcttctagagtgattcgcacgggcccatg<br>
ca1011R Reverse biobricking of R6K<br>
ccgctactagtaGCAGTTCAACCTGTTGATAG<br>
</tt>
Released HQ 2013
R6K origin of replication requires a pir+ or pir116 strain for replication in the absence of a second origin. In most E. coli strains, this is a silent feature.
{pSB1A2-Bca1011}
false
false
_95_
0
483
95
In stock
false
N/A
true
John Anderson
annotation1892271
1
R6K
range1892271
1
27
406
BBa_K300008
1
BBa_K300008
Cm resistance and R6K replication origin
2010-10-04T11:00:00Z
2015-05-08T01:11:51Z
<partinfo></partinfo> - 2009 DNA Distribution;
<partinfo></partinfo> - 2009 DNA Distribution;
<partinfo></partinfo> - 2010 DNA Distribution.
This part contains a Chloramphenicol resistance cassette and the R6K conditional replication origin.
When this part is contained in a pSB*** plasmid, it can be propagated in all E. coli strains. However, when this part is cut with XbaI-SpeI and self-ligated, it can be propagated only in pir+ abd pir116 E. coli strains.
This part has been used to construct <partinfo>BBa_K300000</partinfo> integrative vector.
false
false
_420_
0
2621
9
It's complicated
true
We used BioBrick Standard Assembly.
false
Lorenzo Pasotti, Matteo Meroso, Nicolo' Politi
component2082551
1
BBa_B0010
component2082553
1
BBa_B0012
component2082558
1
BBa_J61001
component2082550
1
BBa_P1004
annotation2082553
1
BBa_B0012
range2082553
1
866
906
annotation2082551
1
BBa_B0010
range2082551
1
778
857
annotation2082550
1
BBa_P1004
range2082550
1
1
769
annotation2082558
1
BBa_J61001
range2082558
1
915
1320
BBa_P1004
1
cmR
chloramphenicol resistance cassette
2006-02-03T12:00:00Z
2015-05-08T01:14:11Z
Released HQ 2013
same part as BBa_P1002 except in reverse orientation.
false
false
_41_6_
0
126
45
In stock
false
true
Reshma Shetty
annotation1897114
1
cmR
range1897114
1
107
769
BBa_B0010
1
BBa_B0010
T1 from E. coli rrnB
2003-11-19T12:00:00Z
2015-08-31T04:07:20Z
Transcriptional terminator consisting of a 64 bp stem-loop.
false
false
_1_
0
24
7
In stock
false
true
Randy Rettberg
annotation7018
1
BBa_B0010
range7018
1
1
80
annotation4184
1
stem_loop
range4184
1
12
55
BBa_B0012
1
BBa_B0012
TE from coliphageT7
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Derived from the TE terminator of T7 bacteriophage between Genes 1.3 and 1.4 <genbank>V01146</genbank>.
Released HQ 2013
Transcription terminator for the <i>E.coli</i> RNA polymerase.
false
false
_1_
0
24
7
In stock
false
<P> <P>Suggested by Sri Kosuri and Drew Endy as a high efficiency terminator. The 5' end cutoff was placed immediately after the TAA stop codon and the 3' end cutoff was placed just prior to the RBS of Gene 1.4 (before AAGGAG).<P> Use anywhere transcription should be stopped when the gene of interest is upstream of this terminator.
false
Reshma Shetty
annotation1687
1
stop
range1687
1
34
34
annotation1690
1
polya
range1690
1
28
41
annotation1686
1
T7 TE
range1686
1
8
27
annotation7020
1
BBa_B0012
range7020
1
1
41
BBa_J61001_sequence
1
tgattcgcacgggcccatggctaattcccatgtcagccgttaagtgttcctgtgtcactcaaaattgctttgagaggctctaagggcttctcagtgcgttacatccctggcttgttgtccacaaccgttaaaccttaaaagctttaaaagccttatatattcttttttttcttataaaacttaaaaccttagaggctatttaagttgctgatttatattaattttattgttcaaacatgagagcttagtacgtgaaacatgagagcttagtacgttagccatgagagcttagtacgttagccatgagggtttagttcgttaaacatgagagcttagtacgttaaacatgagagcttagtacgtgaaacatgagagcttagtacgtactatcaacaggttgaactgc
BBa_B0010_sequence
1
ccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctc
BBa_P1004_sequence
1
gttgatcgggcacgtaagaggttccaactttcaccataatgaaataagatcactaccgggcgtattttttgagttatcgagattttcaggagctaaggaagctaaaatggagaaaaaaatcacgggatataccaccgttgatatatcccaatggcatcgtaaagaacattttgaggcatttcagtcagttgctcaatgtacctataaccagaccgttcagctggatattacggcctttttaaagaccgtaaagaaaaataagcacaagttttatccggcctttattcacattcttgcccgcctgatgaacgctcacccggagtttcgtatggccatgaaagacggtgagctggtgatctgggatagtgttcacccttgttacaccgttttccatgagcaaactgaaacgttttcgtccctctggagtgaataccacgacgatttccggcagtttctccacatatattcgcaagatgtggcgtgttacggtgaaaacctggcctatttccctaaagggtttattgagaatatgttttttgtctcagccaatccctgggtgagtttcaccagttttgatttaaacgtggccaatatggacaacttcttcgcccccgttttcacgatgggcaaatattatacgcaaggcgacaaggtgctgatgccgctggcgatccaggttcatcatgccgtttgtgatggcttccatgtcggccgcatgcttaatgaattacaacagtactgtgatgagtggcagggcggggcgtaataa
BBa_B0012_sequence
1
tcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_K300008_sequence
1
gttgatcgggcacgtaagaggttccaactttcaccataatgaaataagatcactaccgggcgtattttttgagttatcgagattttcaggagctaaggaagctaaaatggagaaaaaaatcacgggatataccaccgttgatatatcccaatggcatcgtaaagaacattttgaggcatttcagtcagttgctcaatgtacctataaccagaccgttcagctggatattacggcctttttaaagaccgtaaagaaaaataagcacaagttttatccggcctttattcacattcttgcccgcctgatgaacgctcacccggagtttcgtatggccatgaaagacggtgagctggtgatctgggatagtgttcacccttgttacaccgttttccatgagcaaactgaaacgttttcgtccctctggagtgaataccacgacgatttccggcagtttctccacatatattcgcaagatgtggcgtgttacggtgaaaacctggcctatttccctaaagggtttattgagaatatgttttttgtctcagccaatccctgggtgagtttcaccagttttgatttaaacgtggccaatatggacaacttcttcgcccccgttttcacgatgggcaaatattatacgcaaggcgacaaggtgctgatgccgctggcgatccaggttcatcatgccgtttgtgatggcttccatgtcggccgcatgcttaatgaattacaacagtactgtgatgagtggcagggcggggcgtaataatactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttatatactagagtgattcgcacgggcccatggctaattcccatgtcagccgttaagtgttcctgtgtcactcaaaattgctttgagaggctctaagggcttctcagtgcgttacatccctggcttgttgtccacaaccgttaaaccttaaaagctttaaaagccttatatattcttttttttcttataaaacttaaaaccttagaggctatttaagttgctgatttatattaattttattgttcaaacatgagagcttagtacgtgaaacatgagagcttagtacgttagccatgagagcttagtacgttagccatgagggtttagttcgttaaacatgagagcttagtacgttaaacatgagagcttagtacgtgaaacatgagagcttagtacgtactatcaacaggttgaactgc
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z