BBa_B0034 1 BBa_B0034 RBS (Elowitz 1999) -- defines RBS efficiency 2003-01-31T12:00:00Z 2015-08-31T04:07:20Z Released HQ 2013 RBS based on Elowitz repressilator. false true _1_ 0 24 7 In stock false Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS. Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a> true Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003. annotation23325 1 conserved range23325 1 5 8 BBa_B0012 1 BBa_B0012 TE from coliphageT7 2003-01-31T12:00:00Z 2015-08-31T04:07:20Z Derived from the TE terminator of T7 bacteriophage between Genes 1.3 and 1.4 <genbank>V01146</genbank>. Released HQ 2013 Transcription terminator for the <i>E.coli</i> RNA polymerase. false false _1_ 0 24 7 In stock false <P> <P>Suggested by Sri Kosuri and Drew Endy as a high efficiency terminator. The 5' end cutoff was placed immediately after the TAA stop codon and the 3' end cutoff was placed just prior to the RBS of Gene 1.4 (before AAGGAG).<P> Use anywhere transcription should be stopped when the gene of interest is upstream of this terminator. false Reshma Shetty annotation1690 1 polya range1690 1 28 41 annotation7020 1 BBa_B0012 range7020 1 1 41 annotation1687 1 stop range1687 1 34 34 annotation1686 1 T7 TE range1686 1 8 27 BBa_K331015 1 BBa_K331015 IPTG Inducible Catechol 1,2-dioxygenase with C-terminal Arginine Tag 2010-06-30T11:00:00Z 2015-05-08T01:12:04Z As with part BBa_K331009 This part is IPTG inducible to produce catechol 1,2-dioxygenase with an C-terminal arginine tag. The arginine sequence allows for the targeting of ECFP into the Lumazine Synthase microcompatment (Bba_K249003). true false _463_ 0 4444 9 Discontinued false None false Lisza Bruder component2072167 1 BBa_B0010 component2072166 1 BBa_K331009 component2072165 1 BBa_B0034 component2072157 1 BBa_R0010 component2072169 1 BBa_B0012 annotation2072157 1 BBa_R0010 range2072157 1 1 200 annotation2072165 1 BBa_B0034 range2072165 1 209 220 annotation2072166 1 BBa_K331009 range2072166 1 227 1177 annotation2072169 1 BBa_B0012 range2072169 1 1274 1314 annotation2072167 1 BBa_B0010 range2072167 1 1186 1265 BBa_R0010 1 LacI promoter (lacI regulated) 2003-01-31T12:00:00Z 2015-05-08T01:14:14Z The Plac insert was PCR'd from the MG1655 strain of E.coli K12. Released HQ 2013 Inverting regulatory region controlled by LacI (<bb_part>BBa_C0010</bb_part>, <bb_part>BBa_C0011</bb_part>, etc.) <p> The pLac regulatory region is a 243 base-pair sequence with standard BioBrick prefix and suffix sections on its ends. It contains two protein binding sites: CAP, which is generally present in E.coli and is assocciated with cell health and availability of glucose., and LacI, the Lac inhibitor <bb_part>BBa_C0010</bb_part> which binds in an dimerized cooperative manner to inhibit the transcription of the protein that follows. In the presence of lactose or IPTG, an analog of lactose, LacI is unable to correctly bind and inhibit transcription. This allows <bb_part>BBa_R0010</bb_part> to be used as a inverter or as a detector of lactose or IPTG. false true _1_ 0 24 7 In stock false <P> <P><P> LacI binds to this regulator. This part is incompatible with species containing active LacI coding regions. Lactose and IPTG disable the operation of LacI and this regulator. This part is incompatible with environments containing lactose or lactose analogs. true annotation1961221 1 end of LacI coding region (inactive) range1961221 1 1 88 annotation1961227 1 start range1961227 1 173 173 annotation1961222 1 BBa_R0010 range1961222 1 1 200 annotation1961223 1 CAP binding site range1961223 1 89 126 annotation1961225 1 -10 range1961225 1 161 166 annotation1961226 1 LacI binding site range1961226 1 166 200 annotation1961224 1 -35 range1961224 1 137 142 BBa_B0010 1 BBa_B0010 T1 from E. coli rrnB 2003-11-19T12:00:00Z 2015-08-31T04:07:20Z Transcriptional terminator consisting of a 64 bp stem-loop. false false _1_ 0 24 7 In stock false true Randy Rettberg annotation7018 1 BBa_B0010 range7018 1 1 80 annotation4184 1 stem_loop range4184 1 12 55 BBa_K331009 1 BBa_K331009 Heat-stable Toxin I 2010-06-27T11:00:00Z 2015-05-08T01:12:04Z Removed stop codon Catechol 1,2-dioxygenase from part (BBa_K331006) with an arginine tag which will allow for targeting into the lumazine Synthase microcompatment (BBa_K331000) false false _463_ 0 4444 9 Not in stock false As in part BBa_K331006 false Lisza Bruder BBa_B0010_sequence 1 ccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctc BBa_R0010_sequence 1 caatacgcaaaccgcctctccccgcgcgttggccgattcattaatgcagctggcacgacaggtttcccgactggaaagcgggcagtgagcgcaacgcaattaatgtgagttagctcactcattaggcaccccaggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacaca BBa_B0034_sequence 1 aaagaggagaaa BBa_K331009_sequence 1 atgaaaaaactgatgctggcgatttttattagcgtgctgagctttccgagctttagccagagc BBa_K331015_sequence 1 caatacgcaaaccgcctctccccgcgcgttggccgattcattaatgcagctggcacgacaggtttcccgactggaaagcgggcagtgagcgcaacgcaattaatgtgagttagctcactcattaggcaccccaggctttacactttatgcttccggctcgtatgttgtgtggaattgtgagcggataacaatttcacacatactagagaaagaggagaaatactagatgaccgtgaacattagccataccgcggaagtgcagcagttttttgaacaggcggcgggctttggcaacgcggcgggcaacccgcgtctgaaacgtattgtgcagcgtctgctgcaagataccgcgcgtctgattgaagatctggatattagcgaagatgaattttggcatgcggtggattatctgaaccgtctgggcggccgtggcgaagcgggcctgctggtggcgggcctgggcattgaacattttctggatctgctgcaagatgcgaaagatcaggaagcgggccgtgtgggcggcaccccgcgtaccattgaaggcccgctgtatgtggcgggcgcgccgattgcgcagggcgaagtgcgtatggatgatggcagcgaagaaggcgtggcgaccgtgatgtttctggaaggccaggtgctggatccgcatggccatccgctgccgggcgcgaccgtggatctgtggcatgcgaacacccgtggcacctatagcttttttgatccgagccagagcgcgtataacctgcgtcgtcgtattgtgaccgatgcgcagggccgttatcgtgcgcgtagcattgtgccgagcggctatggctgcgatccgcagggcccgacccaggaatgcctggatctgctgggccgtcatggccagcgtccggcgcatgtgcatttttttattagcgcgccgggctatcgtcatctgaccacccagattaacctgagcggcgataaatatctgtgggatgattttgcgtatgcgacccgtgatggcctggtgggcgaagtggtgtttgtggaaggcccggaaggccgtcatgcggaactgaaatttgattttcagctgcaacaggcgcagggcggcgcggatgaacagcgtagcggccgtccgcgtgcgctgcaagaagcgactagacgccgccgccgccgccgccgccgccgccgctaatactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata BBa_B0012_sequence 1 tcacactggctcaccttcgggtgggcctttctgcgtttata igem2sbol 1 iGEM to SBOL conversion Conversion of the iGEM parts registry to SBOL2.1 James Alastair McLaughlin Chris J. Myers 2017-03-06T15:00:00.000Z