BBa_K337000
1
BBa_K337000
hsa-miR-122 Binding site pattern (3BS)
2010-10-20T11:00:00Z
2015-05-08T01:12:05Z
http://mirbase.org/cgi-bin/mature.pl?mature_acc=MIMAT0000421
hsa-miR-122 binding site pattern, consisting of 3 perfect matching binding sites. The binding sites are seperated by sequences of 30 base pairs, which are innert in terms of miRNA binding. Additionally, half of the separation sequence is either in front or the end of the whole pattern, to be unconnected to standard restriction sites.
false
false
_461_
0
7259
9
It's complicated
false
The spacer sequences, present between the miRNA binding sites, should have the lowest compatibility to known miRNAs, to minimize unspecific sequence recognition.
false
Adlung L,Al Sabah J,Bayer P,Berrens R,Cristiano E,Flocke L,Kleinsorg S,Kolodziejczyk A,Macias Torre A,Mathur A,Mayilo D,Neumann S,Niopek D,Pisa R,Schad J,Schuhmacher L,Uhlig T,Wu X,Grimm D,Eils R
annotation2091163
1
Spacer 1st half
range2091163
1
1
15
annotation2091165
1
Spacer 1st half
range2091165
1
105
119
annotation2091168
1
Spacer 2nd half
range2091168
1
90
104
annotation2091164
1
Spacer 1st half
range2091164
1
53
67
annotation2091167
1
Spacer 2nd half
range2091167
1
38
52
annotation2091169
1
Spacer 2nd half
range2091169
1
142
156
BBa_K337000_sequence
1
cactgaatccaactgcaaacaccattgtcacactccagcatacatggactgccactgaatccaactgcaaacaccattgtcacactccagcatacatggactgccactgaatccaactgcaaacaccattgtcacactccagcatacatggactgc
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z