BBa_K337004
1
BBa_K337004
hsa-miR-122 Binding site pattern (2BS)
2010-10-20T11:00:00Z
2015-05-08T01:12:06Z
The spacer sequences, present between the miRNA binding sites, should have the lowest compatibility to known miRNAs, to minimize unspecific sequence recognition.
hsa-miR-122 binding site pattern, consisting of 2 perfect matching binding sites. The binding sites are seperated by sequences of 30 base pairs, which are innert in terms of miRNA binding. Additionally, half of the separation sequence is either in front or the end of the whole pattern, to be unconnected to standard restriction sites.
false
false
_461_
0
7259
9
It's complicated
false
http://mirbase.org/cgi-bin/mature.pl?mature_acc=MIMAT0000421
false
Adlung L,Al Sabah J,Bayer P,Berrens R,Cristiano E,Flocke L,Kleinsorg S,Kolodziejczyk A,Macias Torre A,Mathur A,Mayilo D,Neumann S,Niopek D,Pisa R,Schad J,Schuhmacher L,Uhlig T,Wu X,Grimm D,Eils R
annotation2091213
1
Spacer 1st half
range2091213
1
1
15
annotation2091216
1
Spacer 1st half
range2091216
1
53
67
annotation2091214
1
Spacer 2nd half
range2091214
1
38
52
annotation2091215
1
Spacer 2nd half
range2091215
1
90
104
BBa_K337004_sequence
1
cactgaatccaactgcaaacaccattgtcacactccagcatacatggactgccactgaatccaactgcaaacaccattgtcacactccagcatacatggactgc
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z