BBa_B0034
1
BBa_B0034
RBS (Elowitz 1999) -- defines RBS efficiency
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
RBS based on Elowitz repressilator.
false
true
_1_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS.
Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation23325
1
conserved
range23325
1
5
8
BBa_B0012
1
BBa_B0012
TE from coliphageT7
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Derived from the TE terminator of T7 bacteriophage between Genes 1.3 and 1.4 <genbank>V01146</genbank>.
Released HQ 2013
Transcription terminator for the <i>E.coli</i> RNA polymerase.
false
false
_1_
0
24
7
In stock
false
<P> <P>Suggested by Sri Kosuri and Drew Endy as a high efficiency terminator. The 5' end cutoff was placed immediately after the TAA stop codon and the 3' end cutoff was placed just prior to the RBS of Gene 1.4 (before AAGGAG).<P> Use anywhere transcription should be stopped when the gene of interest is upstream of this terminator.
false
Reshma Shetty
annotation7020
1
BBa_B0012
range7020
1
1
41
annotation1690
1
polya
range1690
1
28
41
annotation1687
1
stop
range1687
1
34
34
annotation1686
1
T7 TE
range1686
1
8
27
BBa_B0010
1
BBa_B0010
T1 from E. coli rrnB
2003-11-19T12:00:00Z
2015-08-31T04:07:20Z
Transcriptional terminator consisting of a 64 bp stem-loop.
false
false
_1_
0
24
7
In stock
false
true
Randy Rettberg
annotation7018
1
BBa_B0010
range7018
1
1
80
annotation4184
1
stem_loop
range4184
1
12
55
BBa_K082005
1
BBa_K082005
LacI-Mutant
2008-10-27T12:00:00Z
2015-05-08T01:08:35Z
None
None
false
false
_228_
0
1560
9
It's complicated
false
None
false
Yanting Xue, Binjie Xu
annotation1992781
1
BBa_K082005
range1992781
1
1
1083
BBa_K395400
1
BBa_K395400
RBS-lacIM1-ter
2010-10-04T11:00:00Z
2015-05-08T01:12:21Z
AAAGAGGAGAAATACTAGATGAAGCCGGTGACCCTGTATGACGTGGCGGAATACGCGGGCGTGAGCTACCAAACGGTGAGCCGTGTTGTTAATCAAGCGTCTCATGTGAGCGCCAAGACCCGCGAGAAGGTTGAGGCCGCCATGGCCGAATTAAACTATATCCCGAATCGTGTTGCGCAGCAGTTAGCCGGTAAGCAAAGCCTGTTAATCGGTGTGGCGACGAGCAGCTTAGCGTCACATGCCCCAAGCCAGATCGTGGCCGCCATCAAGAGCCGTGCGGACCAGTTAGGCGCGTCTGTTGTTGTTAGAATGGTGGAGCGCTCTGGTGTGGAGGCGTGCAAGGCCGCCGTTCATAACCTGCTGGCCCAGCGTGTGAGCGGCTTAATTATCAATTACCCATTAGACGATCAAGACGCGATCGCGGTTGAGGCGGCGTGTACCAACGTGCCAGCCCTGTTCCTGGACGTGAGCGATCAAACCCCGATTAATAGCATCATCTTTAGCCACGAGAATGGCACCCGCTTAGGTGTTGAACACTTAGTGGCCCTGGGCCATCAACAGATTGCCCTACTGGCCGGTCCGCTGAGCAGCGTGAGCGCCCGCTTACGCTTAGCGGGTTGGCACAAGTACCTGACCCGTAACCAGATCCAACCAATTGCCGAGCGCGAGGGTGATTGGAGCGCGATGAGCGGCTTCCAGCAGACGATGCAGATGTTAAACGAAGGTATTGTGCCGACCGCCATGTTAGTGGCGAATGACCAAATGGCCTTAGGTGCGATGCGTGCGATCACGGAAAGCGGCTTACGTGTGGGCGCCGACATTAGCGTGGTTGGCTATGATGACACGGAGGATTCTAGCTGCTACATTCCACCAAGCACGACGATTAAGCAAGACTTCCGTTTATTAGGCCAGACGTCTGTTGATCGTCTGTTACAGCTGAGCCAAGGTCAAGCCGTTAAAGGTAACCAATTACTGCCGGTGAGCTTAGTTAAGCGCAAGACGACGTTAGCCCCGAACACCCAGACGGCGAGCCCGCGTGCCCTGGCGGACAGCCTGATGCAATTAGCGCGCCAAGTGAGCCGCTTAGAGTCTGGCCAATGATACTAGAGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCTACTAGAGTCACACTGGCTCACCTTCGGGTGGGCCTTTCTGCGTTTATA
resister this part since the sequence of BBa_K082026 is wrong.lacIM1 is a codon-modified lacI designed to reduce the likelihood of recombination with the wild-type lacI(Subhayu Basu,et al.,2005).
false
false
_505_
0
6396
9
It's complicated
false
test
false
Mitsuhiko Odera
component2082236
1
BBa_K082005
component2082237
1
BBa_B0010
component2082235
1
BBa_B0034
component2082239
1
BBa_B0012
annotation2082236
1
BBa_K082005
range2082236
1
19
1101
annotation2082237
1
BBa_B0010
range2082237
1
1110
1189
annotation2082235
1
BBa_B0034
range2082235
1
1
12
annotation2082239
1
BBa_B0012
range2082239
1
1198
1238
BBa_B0010_sequence
1
ccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctc
BBa_B0034_sequence
1
aaagaggagaaa
BBa_K082005_sequence
1
atgaagccggtgaccctgtatgacgtggcggaatacgcgggcgtgagctaccaaacggtgagccgtgttgttaatcaagcgtctcatgtgagcgccaagacccgcgagaaggttgaggccgccatggccgaattaaactatatcccgaatcgtgttgcgcagcagttagccggtaagcaaagcctgttaatcggtgtggcgacgagcagcttagcgtcacatgccccaagccagatcgtggccgccatcaagagccgtgcggaccagttaggcgcgtctgttgttgttagaatggtggagcgctctggtgtggaggcgtgcaaggccgccgttcataacctgctggcccagcgtgtgagcggcttaattatcaattacccattagacgatcaagacgcgatcgcggttgaggcggcgtgtaccaacgtgccagccctgttcctggacgtgagcgatcaaaccccgattaatagcatcatctttagccacgagaatggcacccgcttaggtgttgaacacttagtggccctgggccatcaacagattgccctactggccggtccgctgagcagcgtgagcgcccgcttacgcttagcgggttggcacaagtacctgacccgtaaccagatccaaccaattgccgagcgcgagggtgattggagcgcgatgagcggcttccagcagacgatgcagatgttaaacgaaggtattgtgccgaccgccatgttagtggcgaatgaccaaatggccttaggtgcgatgcgtgcgatcacggaaagcggcttacgtgtgggcgccgacattagcgtggttggctatgatgacacggaggattctagctgctacattccaccaagcacgacgattaagcaagacttccgtttattaggccagacgtctgttgatcgtctgttacagctgagccaaggtcaagccgttaaaggtaaccaattactgccggtgagcttagttaagcgcaagacgacgttagccccgaacacccagacggcgagcccgcgtgccctggcggacagcctgatgcaattagcgcgccaagtgagccgcttagagtctggccaatga
BBa_K395400_sequence
1
aaagaggagaaatactagatgaagccggtgaccctgtatgacgtggcggaatacgcgggcgtgagctaccaaacggtgagccgtgttgttaatcaagcgtctcatgtgagcgccaagacccgcgagaaggttgaggccgccatggccgaattaaactatatcccgaatcgtgttgcgcagcagttagccggtaagcaaagcctgttaatcggtgtggcgacgagcagcttagcgtcacatgccccaagccagatcgtggccgccatcaagagccgtgcggaccagttaggcgcgtctgttgttgttagaatggtggagcgctctggtgtggaggcgtgcaaggccgccgttcataacctgctggcccagcgtgtgagcggcttaattatcaattacccattagacgatcaagacgcgatcgcggttgaggcggcgtgtaccaacgtgccagccctgttcctggacgtgagcgatcaaaccccgattaatagcatcatctttagccacgagaatggcacccgcttaggtgttgaacacttagtggccctgggccatcaacagattgccctactggccggtccgctgagcagcgtgagcgcccgcttacgcttagcgggttggcacaagtacctgacccgtaaccagatccaaccaattgccgagcgcgagggtgattggagcgcgatgagcggcttccagcagacgatgcagatgttaaacgaaggtattgtgccgaccgccatgttagtggcgaatgaccaaatggccttaggtgcgatgcgtgcgatcacggaaagcggcttacgtgtgggcgccgacattagcgtggttggctatgatgacacggaggattctagctgctacattccaccaagcacgacgattaagcaagacttccgtttattaggccagacgtctgttgatcgtctgttacagctgagccaaggtcaagccgttaaaggtaaccaattactgccggtgagcttagttaagcgcaagacgacgttagccccgaacacccagacggcgagcccgcgtgccctggcggacagcctgatgcaattagcgcgccaagtgagccgcttagagtctggccaatgatactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_B0012_sequence
1
tcacactggctcaccttcgggtgggcctttctgcgtttata
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z