BBa_K398002
1
rubA3
Rubredoxin
2010-06-11T11:00:00Z
2015-05-08T01:12:22Z
Genbank
Rubredoxin 3 of Gordonia sp.TF6
false
false
_506_
0
6320
9
It's complicated
false
Nucleotide sequence optimized for expression in E.coli
false
Mathias Voges
annotation2070746
1
RubA3
range2070746
1
1
171
annotation2070748
1
stop
range2070748
1
169
171
annotation2070747
1
start
range2070747
1
1
3
BBa_K398011
1
BBa_K398011
J23100_J61100_AlkB2_J61100_rubA3
2010-10-06T11:00:00Z
2015-05-08T01:12:22Z
Genebank
AlkB2, a medium-chain alkane 1-monooxygenase originating from Gordonia sp. TF6 is capable of degrading C5-13 alkanes as well as C5-8 cycloalkanes into the corresponding alkanols. It requires rubA3, rubA4 and rubR for proper functioning.
false
false
_506_
0
6322
9
It's complicated
false
Nucleotide sequence optimized for expression in E.coli
false
Kira Schipper and Mathias Voges
component2090643
1
BBa_J61100
component2090647
1
BBa_K398002
component2090642
1
BBa_K398007
annotation2090643
1
BBa_J61100
range2090643
1
1309
1320
annotation2090647
1
BBa_K398002
range2090647
1
1327
1497
annotation2090642
1
BBa_K398007
range2090642
1
1
1300
BBa_J61100
1
BBa_J61100
Ribosome Binding Site Family Member
2007-01-28T12:00:00Z
2015-08-31T02:03:00Z
N/A
{{JCA_Arkin_RBSFamily}}
false
true
_95_
0
483
95
In stock
false
N/A
true
John Anderson
BBa_K398001
1
alkB2
Medium-chain alkane 1-monooxygenase (Gordonia sp. TF6)
2010-06-11T11:00:00Z
2015-05-08T01:12:22Z
Genbank
Alkane 1-monooxygenase from Gordonia sp. TF6
false
false
_506_
0
6320
9
It's complicated
false
Nucleotide sequence optimized for expression in E.coli
false
Hugo F. Cueto Rojas and Mathias Voges
annotation2070745
1
AlkB2
range2070745
1
1
1225
annotation2070743
1
start
range2070743
1
1
3
annotation2070744
1
stop
range2070744
1
1223
1225
BBa_K398007
1
BBa_K398007
J23100_J61100_alkB2
2010-09-02T11:00:00Z
2015-05-08T01:12:22Z
Fujii, T., Narikawa, T., Takeda, K., Kato, J., Biotransformation of various alkanes using the Escherichia coli expressing an alkane hydroxylase system from Gordonia sp. TF6. Bioscience, biotechnology, and biochemistry, 68(10) 2171-2177 (2004)
AlkB2, a medium-chain alkane 1-monooxygenase originating from Gordonia sp. TF6 is capable of degrading C5-13 alkanes as well as C5-8 cycloalkanes into the corresponding alkanols. It requires rubA3, rubA4 and rubR for proper functioning.
false
false
_506_
0
6322
9
It's complicated
false
All EcoRI, PstI, SpeI and Xbal sites were removed
false
Kira Schipper
component2083504
1
BBa_J61100
component2083508
1
BBa_K398001
component2083503
1
BBa_J23100
annotation2083504
1
BBa_J61100
range2083504
1
44
55
annotation2083503
1
BBa_J23100
range2083503
1
1
35
annotation2083508
1
BBa_K398001
range2083508
1
62
1300
BBa_J23100
1
BBa_J23100
constitutive promoter family member
2006-08-03T11:00:00Z
2015-08-31T04:08:40Z
Isolated from library of promoters
Released HQ 2013
Replace later
false
true
_52_
0
483
95
In stock
true
N/A
true
John Anderson
BBa_K398002_sequence
1
atgtctaccttcagatgcccggtatgcgactacgtctacgacgaagctgctggtgctccgcgtgaaggtttcccgccgggtaccgcttgggctaccatcccggacgactggccgtgcccggactgcggtgttcgtgaaaaaatcgacttcgaaggtgttgctgttcgttaa
BBa_K398001_sequence
1
atgtctaccgctccgaccccgccagctgctgacgactctccggttgaatggaaagaccgtaaacgtcacctgtggctgctgggtctgatcccaccaacctctgtcttcctggcgatgctgctggttgctggtttcaacgctatcggtcacggtctggacgttgtttctccggtttggtggtggatcggtccaatactggtatacgtactgctgccgatcctggacgttttcttcggtccggacggttctaacccgccggaagaactgatggaacagctggaaaacgacaaatactaccgttactgcacctacatctacatcccgttccagatcgcttctctggttatggcttgctacctgtggaccgctgacgacctgggttggctgggtatcgacggtggtctgggtctggcttctaaaatcggtctggctctgtctatcggtgctatgggtggtatcggtatcaacaccgctcacgaactgggtcacaaaaaagacgacctggaacgttggctgtctaaaatcaccctggctcagaccttctacggtcacttcttcatcgaacacaaccgtggtcaccacgttcgtgttgctaccccggaagacccggcttcgagtaggttcggcgagagcttctggagattcctcccgcgttctgtttggggttctctgaaatcttctgttgaactggaacgtaaacgtctggaacgtgctgacaaaccgttctggcacccgtctaacgacgttctgaacgcttgggctatgtctatcgttctgtggggtgctctgaccgctatcttcggttgggaaatcctgccgttcttagttatccaggctgtgtacggattctctctgctggaaaccgttaactacctggaacactacggtctgctgcgtcagaaaaccaacaccggccgttacgaacgttgcaccccggaacactcttggaactctgaccacatctgcaccaacatcttcctgtaccacctgcaacgtcactctgaccaccacgctaacccgacccgtcgttaccagaccctgcgttctttcgacggtgctccgaacctgccgtctggttacgcttctatgatcaccctggcttacttcccgccggtttggcgtcgtgttatggaccgtcgtgttctggaccactacgacggtgacgttgaacgtgttaacatcgctccgcaccgtcgtgaacgtgttttagctgaacatggtgtaagcccgcgttaataa
BBa_J23100_sequence
1
ttgacggctagctcagtcctaggtacagtgctagc
BBa_J61100_sequence
1
aaagaggggaca
BBa_K398007_sequence
1
ttgacggctagctcagtcctaggtacagtgctagctactagagaaagaggggacatactagatgtctaccgctccgaccccgccagctgctgacgactctccggttgaatggaaagaccgtaaacgtcacctgtggctgctgggtctgatcccaccaacctctgtcttcctggcgatgctgctggttgctggtttcaacgctatcggtcacggtctggacgttgtttctccggtttggtggtggatcggtccaatactggtatacgtactgctgccgatcctggacgttttcttcggtccggacggttctaacccgccggaagaactgatggaacagctggaaaacgacaaatactaccgttactgcacctacatctacatcccgttccagatcgcttctctggttatggcttgctacctgtggaccgctgacgacctgggttggctgggtatcgacggtggtctgggtctggcttctaaaatcggtctggctctgtctatcggtgctatgggtggtatcggtatcaacaccgctcacgaactgggtcacaaaaaagacgacctggaacgttggctgtctaaaatcaccctggctcagaccttctacggtcacttcttcatcgaacacaaccgtggtcaccacgttcgtgttgctaccccggaagacccggcttcgagtaggttcggcgagagcttctggagattcctcccgcgttctgtttggggttctctgaaatcttctgttgaactggaacgtaaacgtctggaacgtgctgacaaaccgttctggcacccgtctaacgacgttctgaacgcttgggctatgtctatcgttctgtggggtgctctgaccgctatcttcggttgggaaatcctgccgttcttagttatccaggctgtgtacggattctctctgctggaaaccgttaactacctggaacactacggtctgctgcgtcagaaaaccaacaccggccgttacgaacgttgcaccccggaacactcttggaactctgaccacatctgcaccaacatcttcctgtaccacctgcaacgtcactctgaccaccacgctaacccgacccgtcgttaccagaccctgcgttctttcgacggtgctccgaacctgccgtctggttacgcttctatgatcaccctggcttacttcccgccggtttggcgtcgtgttatggaccgtcgtgttctggaccactacgacggtgacgttgaacgtgttaacatcgctccgcaccgtcgtgaacgtgttttagctgaacatggtgtaagcccgcgttaataa
BBa_K398011_sequence
1
ttgacggctagctcagtcctaggtacagtgctagctactagagaaagaggggacatactagatgtctaccgctccgaccccgccagctgctgacgactctccggttgaatggaaagaccgtaaacgtcacctgtggctgctgggtctgatcccaccaacctctgtcttcctggcgatgctgctggttgctggtttcaacgctatcggtcacggtctggacgttgtttctccggtttggtggtggatcggtccaatactggtatacgtactgctgccgatcctggacgttttcttcggtccggacggttctaacccgccggaagaactgatggaacagctggaaaacgacaaatactaccgttactgcacctacatctacatcccgttccagatcgcttctctggttatggcttgctacctgtggaccgctgacgacctgggttggctgggtatcgacggtggtctgggtctggcttctaaaatcggtctggctctgtctatcggtgctatgggtggtatcggtatcaacaccgctcacgaactgggtcacaaaaaagacgacctggaacgttggctgtctaaaatcaccctggctcagaccttctacggtcacttcttcatcgaacacaaccgtggtcaccacgttcgtgttgctaccccggaagacccggcttcgagtaggttcggcgagagcttctggagattcctcccgcgttctgtttggggttctctgaaatcttctgttgaactggaacgtaaacgtctggaacgtgctgacaaaccgttctggcacccgtctaacgacgttctgaacgcttgggctatgtctatcgttctgtggggtgctctgaccgctatcttcggttgggaaatcctgccgttcttagttatccaggctgtgtacggattctctctgctggaaaccgttaactacctggaacactacggtctgctgcgtcagaaaaccaacaccggccgttacgaacgttgcaccccggaacactcttggaactctgaccacatctgcaccaacatcttcctgtaccacctgcaacgtcactctgaccaccacgctaacccgacccgtcgttaccagaccctgcgttctttcgacggtgctccgaacctgccgtctggttacgcttctatgatcaccctggcttacttcccgccggtttggcgtcgtgttatggaccgtcgtgttctggaccactacgacggtgacgttgaacgtgttaacatcgctccgcaccgtcgtgaacgtgttttagctgaacatggtgtaagcccgcgttaataatactagagaaagaggggacatactagatgtctaccttcagatgcccggtatgcgactacgtctacgacgaagctgctggtgctccgcgtgaaggtttcccgccgggtaccgcttgggctaccatcccggacgactggccgtgcccggactgcggtgttcgtgaaaaaatcgacttcgaaggtgttgctgttcgttaa
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z