BBa_K415049
1
BBa_K415049
Cm Backbone with pBR322 Derived Origin
2010-10-25T11:00:00Z
2015-05-08T01:12:27Z
This backbone was constructed with the standard biobrick plasmid construction method. The origin is K415039 and the chloramphenicol resistance is from P1004.
After several failures in getting the correct colonies with the ccdB containing base vector I51020, the appropriate base vector region was obtained by PCR of an existing version 5 backbone containing RFP (pSB3T5). The RFP version of the base vector allowed for easy screening for correct colonies.
This part is a biobrick backbone with chloramphenicol resistance and pBR322 derived origin. The copy number is expected to be around 20. The characterization of this part is currently happening, and more data will be uploaded soon.
Note: The backbone contains an extra VR sequencing site from the origin K415039. This site will be removed in the final version pSB6C5. Also, cells containing this plasmid grow slower than usual.
false
false
_525_
0
6742
9
It's complicated
false
The extra reverse sequencing site needs to be removed in the final version (pSB6C5). The resistance P1004 was placed before the origin operon K415039 to provide a promoter to the copy-number regulating protein ROP.
false
Shawn Pan
annotation2103815
1
RBS
range2103815
1
969
974
annotation2103810
1
pMB1 Origin
range2103810
1
1583
2197
annotation2103807
1
VF2 Site
range2103807
1
2281
2301
annotation2103795
1
Biobrick Prefix
range2103795
1
2405
2426
annotation2103809
1
P1004 (Cm resistance)
range2103809
1
184
952
annotation2103813
1
ROP
range2103813
1
979
1172
annotation2103801
1
Extra VR site
range2103801
1
1479
1498
annotation2103799
1
Biobrick Suffix
range2103799
1
1
21
annotation2103804
1
VR Site
range2103804
1
116
135
BBa_K415049_sequence
1
tactagtagcggccgctgcaggagtcactaagggttagttagttagattagcagaaagtcaaaagcctccgaccggaggcttttgactaaaacttcccttggggttatcattggggctcactcaaaggcggtaatcagataaaaaaaatccttagctttcgctaaggatgatttctgctagaggttgatcgggcacgtaagaggttccaactttcaccataatgaaataagatcactaccgggcgtattttttgagttatcgagattttcaggagctaaggaagctaaaatggagaaaaaaatcacgggatataccaccgttgatatatcccaatggcatcgtaaagaacattttgaggcatttcagtcagttgctcaatgtacctataaccagaccgttcagctggatattacggcctttttaaagaccgtaaagaaaaataagcacaagttttatccggcctttattcacattcttgcccgcctgatgaacgctcacccggagtttcgtatggccatgaaagacggtgagctggtgatctgggatagtgttcacccttgttacaccgttttccatgagcaaactgaaacgttttcgtccctctggagtgaataccacgacgatttccggcagtttctccacatatattcgcaagatgtggcgtgttacggtgaaaacctggcctatttccctaaagggtttattgagaatatgttttttgtctcagccaatccctgggtgagtttcaccagttttgatttaaacgtggccaatatggacaacttcttcgcccccgttttcacgatgggcaaatattatacgcaaggcgacaaggtgctgatgccgctggcgatccaggttcatcatgccgtttgtgatggcttccatgtcggccgcatgcttaatgaattacaacagtactgtgatgagtggcagggcggggcgtaataatactagagccttacacggaggcatcagtgaccaaacaggaaaaaaccgcccttaacatggcccgctttatcagaagccagacattaacgcttctggagaaactcaacgagctggacgcggatgaacaggcagacatctgtgaatcgcttcacgaccacgctgatgagctttaccgcagctgcctcgcgcgtttcggtgatgacggtgaaaacctctgacacatgcagctcccggagacggtcacagcttgtctgtaagcggatgccgggagcagacaagcccgtcagggcgcgtcagcgggtgttggcgggtgtcggggcgcagccatgacccagtcacgtagcgatagcggagtgtatactggcttaactatgcggcatcagagcagattgtactgagagtgcaccatatgcggtgtgaaataccgcacagatgcgtaaggagaaaataccgcatcaggcgctcttccgcttcctcgctcactgactcgctgcgctcggtcgttcggctgcggcgagcggtatcagctcactcaaaggcggtaatacggttatccacagaatcaggggataacgcaggaaagaacatgtgagcaaaaggccagcaaaaggccaggaaccgtaaaaaggccgcgttgctggcgtttttccataggctccgcccccctgacgagcatcacaaaaatcgacgctcaagtcagaggtggcgaaacccgacaggactataaagataccaggcgtttccccctggaagctccctcgtgcgctctcctgttccgaccctgccgcttaccggatacctgtccgcctttctcccttcgggaagcgtggcgctttctcatagctcacgctgtaggtatctcagttcggtgtaggtcgttcgctccaagctgggctgtgtgcacgaaccccccgttcagcccgaccgctgcgccttatccggtaactatcgtcttgagtccaacccggtaagacacgacttatcgccactggcagcagccactggtaacaggattagcagagcgaggtatgtaggcggtgctacagagttcttgaagtggtggcctaactacggctacactagaaggacagtatttggtatctgcgctctgctgaagccagttaccttcggaaaaagagttggtagctcttgatccggcaaacaaaccaccgctggtagcggtggtttttttgtttgcaagcagcagattacgcgcagaaaaaaaggatctcaagaagatcctttgatcttactagctccggcaaaaaaacgggcaaggtgtcaccaccctgccctttttctttaaaaccgaaaagattacttcgcgtttgccacctgacgtctaagaaaaggaatattcagcaatttgcccgtgccgaagaaaggcccacccgtgaaggtgagccagtgagttgattgctacgtaattagttagttagcccttagtgactcgaattcgcggccgcttctagag
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z