BBa_B0034
1
BBa_B0034
RBS (Elowitz 1999) -- defines RBS efficiency
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
RBS based on Elowitz repressilator.
false
true
_1_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS.
Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation23325
1
conserved
range23325
1
5
8
BBa_K417002
1
ACCoxidase
1-aminocyclopropane-1-carboxylate (ACC) oxidase
2010-10-19T11:00:00Z
2015-05-08T01:12:28Z
Solanum lycopersicum (Tomato) (Lycopersicon esculentum) codon optimized for <i>E. coli</i>.
This is the protein coding sequence of 1-aminocyclopropane-1-carboxylate (ACC) oxidase, which catalyses the formation of ethylene from 1-aminocyclopropane-1-carboxylate under the presence of ascorbate and O2.
(1-aminocyclopropane-1-carboxylate + ascorbate + O2 = ethylene + cyanide + dehydroascorbate + CO2 + 2 H2O)
This enzyme is commonly referred to as ACC oxidase or ethylene forming enzyme (EFE).
false
false
_537_
0
6513
9
Not in stock
false
Codon optimization for <i>E. coli</i> and removal of biobrick restriction sites.
false
Ben Porebski, Andrew Perry
annotation2090378
1
Start
range2090378
1
1
3
annotation2090379
1
ACC Oxidase
range2090379
1
1
948
annotation2090380
1
Stop
range2090380
1
946
948
BBa_K417005
1
BBa_K417005
RBS + ACC Oxidase
2010-10-25T11:00:00Z
2015-05-08T01:12:28Z
Tomato
RBS + ACC Oxidase
false
false
_537_
0
6513
9
Not in stock
false
Nil
false
Benjamin Porebski
component2101585
1
BBa_K417002
component2101581
1
BBa_B0034
annotation2101581
1
BBa_B0034
range2101581
1
1
12
annotation2101585
1
BBa_K417002
range2101585
1
19
966
BBa_K417005_sequence
1
aaagaggagaaatactagatggaaaacttcccgatcatcaacctggagaaactgaatggtgacgaacgtgccaatacaatggaaatgattaaagacgcctgtgagaactggggcttttttgaactggtgaaccacggtatccctcatgaagtgatggacacggtcgagaaaatgaccaaaggccactataaaaaatgtatggagcagcgctttaaagagctggttgccagcaaaggtctggaggctgttcaggcagaagtgaccgatctggattgggagagcaccttctttctgcgtcatctgccgaccagtaacattagtcaggtgccggacctggatgaagaatatcgtgaggtcatgcgcgatttcgccaaacgcctggaaaaactggccgaagaactgctggatctgctgtgtgaaaatctggggctggaaaaaggttatctgaaaaacgccttctatggctctaaaggaccgaattttgggacgaaagtcagcaattatccgccttgtccgaaaccggatctgatcaaaggactgcgtgcccacaccgatgccggtggtattatcctgctgtttcaagacgacaaagtgtcaggcctgcaactgctgaaagacgaacagtggatcgatgttcctcctatgcgccactctattgtggtgaatctgggtgaccaactggaggttattacgaacggaaaatataaaagtgtgctgcaccgcgttattgctcagacagatggcacccgtatgagtctggcatcattctataatccgggctctgatgctgtaatctatccggccaaaacgctggtagaaaaagaggccgaggagtctacacaggtttatccgaaatttgtgttcgacgactatatgaaactgtatgccgggctgaaattccaagcaaaagaacctcgcttcgaagccatgaaagcaatggagagcgatccgattgctagtgcctaa
BBa_B0034_sequence
1
aaagaggagaaa
BBa_K417002_sequence
1
atggaaaacttcccgatcatcaacctggagaaactgaatggtgacgaacgtgccaatacaatggaaatgattaaagacgcctgtgagaactggggcttttttgaactggtgaaccacggtatccctcatgaagtgatggacacggtcgagaaaatgaccaaaggccactataaaaaatgtatggagcagcgctttaaagagctggttgccagcaaaggtctggaggctgttcaggcagaagtgaccgatctggattgggagagcaccttctttctgcgtcatctgccgaccagtaacattagtcaggtgccggacctggatgaagaatatcgtgaggtcatgcgcgatttcgccaaacgcctggaaaaactggccgaagaactgctggatctgctgtgtgaaaatctggggctggaaaaaggttatctgaaaaacgccttctatggctctaaaggaccgaattttgggacgaaagtcagcaattatccgccttgtccgaaaccggatctgatcaaaggactgcgtgcccacaccgatgccggtggtattatcctgctgtttcaagacgacaaagtgtcaggcctgcaactgctgaaagacgaacagtggatcgatgttcctcctatgcgccactctattgtggtgaatctgggtgaccaactggaggttattacgaacggaaaatataaaagtgtgctgcaccgcgttattgctcagacagatggcacccgtatgagtctggcatcattctataatccgggctctgatgctgtaatctatccggccaaaacgctggtagaaaaagaggccgaggagtctacacaggtttatccgaaatttgtgttcgacgactatatgaaactgtatgccgggctgaaattccaagcaaaagaacctcgcttcgaagccatgaaagcaatggagagcgatccgattgctagtgcctaa
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z