BBa_B0034
1
BBa_B0034
RBS (Elowitz 1999) -- defines RBS efficiency
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
RBS based on Elowitz repressilator.
false
true
_1_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS.
Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation23325
1
conserved
range23325
1
5
8
BBa_K538002
1
SheDnaK
SheDnaK (Shewanella sp. Ac10)
2011-07-28T11:00:00Z
2015-05-08T01:12:36Z
-
-
false
false
_704_
0
9985
9
Not in stock
false
-
false
Bas Stringer (Sequence by Paul van Dieken)
annotation2127787
1
A > G (Recode for PvuII site)
range2127787
1
345
345
annotation2124233
1
Start Codon
range2124233
1
1
3
annotation2127789
1
A > G (Recode for EcoRI site)
range2127789
1
726
726
annotation2127790
1
T > G (Recode for XbaI site)
range2127790
1
945
945
annotation2127791
1
A > G (Recode for PvuII site)
range2127791
1
1281
1281
annotation2124234
1
Double Stop Codon
range2124234
1
1915
1920
annotation2127792
1
T > G (Recode for NheI site)
range2127792
1
1671
1671
BBa_K538102
1
BBa_K538102
RBS + SheDnaK
2011-09-07T11:00:00Z
2015-05-08T01:12:37Z
-
-
false
false
_704_
0
9985
9
Not in stock
false
-
false
Bas Stringer
component2133887
1
BBa_B0034
component2133895
1
BBa_K538002
annotation2133887
1
BBa_B0034
range2133887
1
1
12
annotation2133895
1
BBa_K538002
range2133895
1
19
1938
BBa_B0034_sequence
1
aaagaggagaaa
BBa_K538102_sequence
1
aaagaggagaaatactagatgggcaaaattattggtatcgatttaggcacaacaaactcgtgtgtagcagtccttgatggcggcaaagcacgcgtaattgaaaacgcagagggtgatcgtacaaccccatcaattatcgcttataccgatgatgaaattattgtaggccaaccagcaaagcgtcaagctgtaactaacccaacaaacacattctttgccattaagcgtttaatcggccgtcgttttaaagatgacgaagtacaacgtgacgtgaacatcatgccattcaaaattatcggagctgataatggtgatgcatgggttgaatcacgtggtaataaaatggcaccaccacaagtttcggctgaaatcttgaaaaagatgaaaaagactgctgaagactttttaggtgaagaagtgactgaagcggttattaccgttcctgcttactttaacgattcacaacgtcaagcaacgaaagatgctggtcgtatcgcaggtcttgatgttaagcgtattatcaacgaacctactgctgctgcacttgcatacggtatcgataagaagcaaggcgacaacattgttgctgtatacgatttaggtggtggtacattcgatatttctatcatcgaaatcgacagtaacgatggcgaccaaacatttgaagtactagcaaccaatggtgatactcacttaggtggtgaagactttgataaccgtatgattaactatttagctgatgagttcaaaaaagaccagggcttagatcttcgtagagatcctttagcaatgcaacgtttgaaagaagcggctgaaaaagcaaaaatcgagctttcaagcactaaccacactgaagttaacttgccttacatcactgctgatgcatcaggtcctaagcatttagtggttaaaattactcgtgctaagttagagtcattagttgaagatttaattcaacgtacgctagagccgcttaaagttgcactagctgatgctgatttatcaatatctgatatcaatgaagtgattcttgttggtggccagactcgtatgcctaaagtacaagaagcagtaactaacttcttcggcaaagagcctcgtaaagatgttaaccctgatgaagcggttgcagttggcgcggcgattcaggctggcgtactttctggtgaagtgaaagacgtacttctacttgacgttacaccactatctcttggtattgaaaccatgggcagtgtgatgaccaagcttatcgagaagaacaccactatcccgactaaagctcagcaagtattctcaacggctgacgacaaccaaagtgcagtgacaattcacgtacttcaaggtgagcgtaagcaagctagtgccaacaagtcattaggtcaatttaacctagaaggtattgagccagcaccacgtggccaaccacaggttgaagtgatgttcgacattgatgctgatggtatcttacatgtgtctgcaacagacaagaaaacaggtaagaaacaaaatattactatcaaagcttcttcaggtttgtctgatgaagaagttgaacaaatggtacgtgatgcagaagctcatgctgatgaagatgcgaaatttgaagagttagttcaagcgcgtaatcaagcagatggtttagctcattcaactaaaaaacaagttgaagaagctggcgatgcactagcgagcgacgaaaaagaaaagattgaagcggcaattgcaactttagaaactgccataaaaggcaaagataaagaagctattgatacagctactcaagcgttaatcgaagcgtctgctaagttaatggaaattgctcaagctaaagctcaaggtgaagcagaaggtcaagcacacgatgctggccaagaaaagcctgctgatgatgttgttgatgctgagttcgaagaagttaaagacgacaaaaagtaataa
BBa_K538002_sequence
1
atgggcaaaattattggtatcgatttaggcacaacaaactcgtgtgtagcagtccttgatggcggcaaagcacgcgtaattgaaaacgcagagggtgatcgtacaaccccatcaattatcgcttataccgatgatgaaattattgtaggccaaccagcaaagcgtcaagctgtaactaacccaacaaacacattctttgccattaagcgtttaatcggccgtcgttttaaagatgacgaagtacaacgtgacgtgaacatcatgccattcaaaattatcggagctgataatggtgatgcatgggttgaatcacgtggtaataaaatggcaccaccacaagtttcggctgaaatcttgaaaaagatgaaaaagactgctgaagactttttaggtgaagaagtgactgaagcggttattaccgttcctgcttactttaacgattcacaacgtcaagcaacgaaagatgctggtcgtatcgcaggtcttgatgttaagcgtattatcaacgaacctactgctgctgcacttgcatacggtatcgataagaagcaaggcgacaacattgttgctgtatacgatttaggtggtggtacattcgatatttctatcatcgaaatcgacagtaacgatggcgaccaaacatttgaagtactagcaaccaatggtgatactcacttaggtggtgaagactttgataaccgtatgattaactatttagctgatgagttcaaaaaagaccagggcttagatcttcgtagagatcctttagcaatgcaacgtttgaaagaagcggctgaaaaagcaaaaatcgagctttcaagcactaaccacactgaagttaacttgccttacatcactgctgatgcatcaggtcctaagcatttagtggttaaaattactcgtgctaagttagagtcattagttgaagatttaattcaacgtacgctagagccgcttaaagttgcactagctgatgctgatttatcaatatctgatatcaatgaagtgattcttgttggtggccagactcgtatgcctaaagtacaagaagcagtaactaacttcttcggcaaagagcctcgtaaagatgttaaccctgatgaagcggttgcagttggcgcggcgattcaggctggcgtactttctggtgaagtgaaagacgtacttctacttgacgttacaccactatctcttggtattgaaaccatgggcagtgtgatgaccaagcttatcgagaagaacaccactatcccgactaaagctcagcaagtattctcaacggctgacgacaaccaaagtgcagtgacaattcacgtacttcaaggtgagcgtaagcaagctagtgccaacaagtcattaggtcaatttaacctagaaggtattgagccagcaccacgtggccaaccacaggttgaagtgatgttcgacattgatgctgatggtatcttacatgtgtctgcaacagacaagaaaacaggtaagaaacaaaatattactatcaaagcttcttcaggtttgtctgatgaagaagttgaacaaatggtacgtgatgcagaagctcatgctgatgaagatgcgaaatttgaagagttagttcaagcgcgtaatcaagcagatggtttagctcattcaactaaaaaacaagttgaagaagctggcgatgcactagcgagcgacgaaaaagaaaagattgaagcggcaattgcaactttagaaactgccataaaaggcaaagataaagaagctattgatacagctactcaagcgttaatcgaagcgtctgctaagttaatggaaattgctcaagctaaagctcaaggtgaagcagaaggtcaagcacacgatgctggccaagaaaagcctgctgatgatgttgttgatgctgagttcgaagaagttaaagacgacaaaaagtaataa
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z