BBa_K562019
1
PduD40-GFP
Salty_PduD40-GFPssrA
2011-09-17T11:00:00Z
2015-05-08T01:12:42Z
Derived from Salmonella enterica serovar Typhimurium LT2 genomic sequence and a plasmid described in this paper:
DeLisa MP, Samuelson P, Palmer T, Georgiou G. Genetic analysis of the twin arginine translocator secretion pathway in bacteria. J Biol Chem. 2002 Aug 16;277(33):29825-31.
This is a composite part comprising a constitutive promoter, which is the tatABCD promoter from E. coli K-12, driving production of the initial 40 residues of the PduD protein from Salmonella enterica serovar Typhimurium LT2 (identical to part BBa_K562002), which is itself fused in-frame to GFP. The GFP gene product also carries a C-terminal ssrA degradation tag. Production of PduD40-GFP-ssrA has been verified by Western immunoblotting (anti-GFP) when co-expressed with BBa_K562009 encosing a bacterial microcompartment (BMC). The construct is cloned as an EcoRI / PstI fragment into pSB1C3. The clone is also known as pSB-D40-GFPssrA in the Sargent Laboratory, Dundee, UK.
false
false
_730_
0
8083
9
It's complicated
false
None
false
Frank Sargent
annotation2131873
1
PduD40 Tag
range2131873
1
119
238
annotation2131871
1
BBa_K562002
range2131871
1
1
244
annotation2131874
1
GFP
range2131874
1
245
955
annotation2131875
1
ssrA degradation tag
range2131875
1
962
994
annotation2131872
1
synthetic RBS
range2131872
1
107
112
BBa_K562019_sequence
1
tgtcggttggcgcaaaacacgctgattttttcatcgctcaaggcgggccgtgtaacgtataatgcggctttgtttaatcatcatctaccacagaggaggatcacacagaggaacaggtatggaaattaatgaaaaattgctgcgccagataattgaagacgtactccgcgatatgaagggcagcgataaacccgtctcgtttaatgcgcctgcggcatccacagcaccacagaccgcttctagaagtaaaggagaagaacttttcactggagttgtcccaattcttgttgaattagatggtgatgttaatgggcacaaattttctgtcagtggagagggtgaaggtgatgcaacatacggaaaacttacccttaaatttatttgcactactggaaaactacctgttccatggccaacacttgtcactactttcgcgtatggtcttcaatgctttgcgagatacccagatcatatgaaacagcatgactttttcaagagtgccatgcccgaaggttatgtacaggaaagaactatatttttcaaagatgacgggaactacaagacacgtgctgaagtcaagtttgaaggtgatacccttgttaatagaatcgagttaaaaggtattgattttaaagaagatggaaacattcttggacacaaattggaatacaactataactcacacaatgtatacatcatggcagacaaacaaaagaatggaatcaaagttaacttcaaaattagacacaacattgaagatggaagcgttcaactagcagaccattatcaacaaaatactccaattggcgatggccctgtccttttaccagacaaccattacctgtccacacaatctgccctttcgaaagatcccaacgaaaagagagaccacatggtccttcttgagtttgtaacagctgctgggattacacatggcatggatgaactatacaaagtcgacgcagcaaacgacgaaaactacgctttagcagcttaagcatgcaagctt
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z