BBa_K566003
1
CFP opt
CFP optimized for E. coli
2011-09-25T11:00:00Z
2015-05-08T01:12:42Z
Synthesized DNA.
Cyan fluorescent protein optimized for expression in E. coli.
It was optimized using preferential codons, originally taken from BBa_E0022
false
false
_734_
0
8650
9
Not in stock
false
Preferential codons were implemented for improving expression in E. coli.
Analysis of illegal sites was made, they were found and removed.
false
Daniel Rodriguez
annotation2141605
1
SsrA
range2141605
1
718
758
annotation2141565
1
Optimized CFP
range2141565
1
1
762
annotation2141604
1
Initial codon
range2141604
1
1
3
annotation2141573
1
Stop
range2141573
1
759
762
BBa_K566004
1
CFP
CFP protein generator without transcription terminator
2011-09-25T11:00:00Z
2015-05-08T01:12:42Z
Synthesized DNA.
Protein generator of cyan fluorescent protein without transcription terminator. It may be negative regulated by Mnt repressor (BBa_C0072).
false
false
_734_
0
8650
9
Not in stock
true
Codon optimization for better expression in E. coli. Illegal sites were removed.
false
Daniel Rodriguez
component2142652
1
BBa_R0073
component2142659
1
BBa_K566003
component2142654
1
BBa_B0034
annotation2142659
1
BBa_K566003
range2142659
1
80
841
annotation2142652
1
BBa_R0073
range2142652
1
1
67
annotation2142654
1
BBa_B0034
range2142654
1
68
79
BBa_R0073
1
Mnt
Promoter (Mnt regulated)
2004-01-27T12:00:00Z
2015-05-08T01:14:15Z
enterobacteriophage p22
Released HQ 2013
false
false
_1_
0
24
7
In stock
false
unsure of where -35 site is
true
crackdots
annotation318638
1
dimer right half
range318638
1
32
38
annotation302669
1
mnt
range302669
1
1
67
annotation318643
1
-10
range318643
1
47
52
annotation318636
1
dimer left half
range318636
1
23
29
BBa_B0034
1
BBa_B0034
RBS (Elowitz 1999) -- defines RBS efficiency
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
RBS based on Elowitz repressilator.
false
true
_1_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS.
Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation23325
1
conserved
range23325
1
5
8
BBa_K566004_sequence
1
ctcgaggtgagtgcacagtactaggtccacggtgacctagatctcctatagtgagtcgtattaatttaaagaggagaaaatggtttccaaaggcgaagaactgtttaccggtgttgttccgattctggttgaactggatggtgatgttaatggccacaaattttcagttagcggtgaaggcgaaggtgatgcaacctatggtaaactgaccctgaaatttatctgtaccaccggcaaactgccggttccgtggccgaccctggttaccaccctgacctggggtgttcagtgttttagccgttatccggatcatatgaaacagcacgattttttcaaaagcgcaatgccggaaggttatgttcaagaacgtaccatcttcttcaaagatgacggcaactataaaacccgtgccgaagttaaatttgaaggtgataccctggtgaatcgcattgaactgaaaggcatcgatttcaaagaggatggtaatatcctgggccacaaactggaatataattatatcagccacaacgtgtatatcaccgcagacaaacagaaaaatggcatcaaagccaactttaaaatccgccacaatattgaagatggcagcgttcagctggcagatcattatcagcagaataccccgattggtgatggtccggttctgctgccggataatcattatctgagcacccagagcgcactgagcaaagatccgaatgaaaaacgtgatcacatggtgctgctggaatttgttaccgcagcaggtattaccctgggtatggatgaactgtataaacgtccggcagccaatgatgaaaattatgcactggttgcctgataa
BBa_R0073_sequence
1
ctcgaggtgagtgcacagtactaggtccacggtgacctagatctcctatagtgagtcgtattaattt
BBa_B0034_sequence
1
aaagaggagaaa
BBa_K566003_sequence
1
atggtttccaaaggcgaagaactgtttaccggtgttgttccgattctggttgaactggatggtgatgttaatggccacaaattttcagttagcggtgaaggcgaaggtgatgcaacctatggtaaactgaccctgaaatttatctgtaccaccggcaaactgccggttccgtggccgaccctggttaccaccctgacctggggtgttcagtgttttagccgttatccggatcatatgaaacagcacgattttttcaaaagcgcaatgccggaaggttatgttcaagaacgtaccatcttcttcaaagatgacggcaactataaaacccgtgccgaagttaaatttgaaggtgataccctggtgaatcgcattgaactgaaaggcatcgatttcaaagaggatggtaatatcctgggccacaaactggaatataattatatcagccacaacgtgtatatcaccgcagacaaacagaaaaatggcatcaaagccaactttaaaatccgccacaatattgaagatggcagcgttcagctggcagatcattatcagcagaataccccgattggtgatggtccggttctgctgccggataatcattatctgagcacccagagcgcactgagcaaagatccgaatgaaaaacgtgatcacatggtgctgctggaatttgttaccgcagcaggtattaccctgggtatggatgaactgtataaacgtccggcagccaatgatgaaaattatgcactggttgcctgataa
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z