BBa_K624003
1
BBa_K624003
rep gene
2011-09-29T11:00:00Z
2015-05-08T01:12:55Z
yes
Released HQ 2013
only the plasmid contain rep gene can be used in magnetic bacteria AMB-1
false
false
_796_
0
6664
9
In stock
false
yes
false
SHANG-JUI TSAI, CHUN-YU LAI
annotation2148116
1
rbs from pMGT
range2148116
1
1
24
annotation2148115
1
rep (pMGT)
range2148115
1
28
857
annotation2148127
1
start
range2148127
1
25
27
BBa_K624030
1
BBa_K624030
pYMB+[13-R]+[CHAMP-Y]
2011-10-03T11:00:00Z
2015-05-08T01:12:55Z
BBa_K624004
pYMB indicates pUC19 with ori+Pmsp1+rep. In this construct, 13-R and Y-CHAMP are ligated in the downstream of ori+Pmsp1+rep, aimed at serving as optogenetic wireless neurostimulator with OFF state (no BRET between EYFP and rLuc) as default mode. This design is made in case EYFP fusion on N-terminal of mms13 has negative effects on its folding.
false
false
_796_
0
9029
9
Not in stock
false
to fit biobrick assembly standards
false
Shang-Jui Tsai
component2152414
1
BBa_K624012
component2152403
1
BBa_K624004
component2152411
1
BBa_K624007
component2152406
1
BBa_K624012
component2152419
1
BBa_K624025
annotation2152414
1
BBa_K624012
range2152414
1
2957
2987
annotation2152411
1
BBa_K624007
range2152411
1
1188
2948
annotation2152406
1
BBa_K624012
range2152406
1
1151
1181
annotation2152419
1
BBa_K624025
range2152419
1
2994
3773
annotation2152403
1
BBa_K624004
range2152403
1
1
1142
BBa_K624007
1
BBa_K624007
mms13-rLuc
2011-09-30T11:00:00Z
2015-05-08T01:12:55Z
mms13 from genomic DNA of Magnetospirillum magneticum AMB-1
alternative design for optogenetic wireless neurostimulation preventing blockade of signaling peptide located on helix 1 of mms13
false
false
_796_
0
9029
9
It's complicated
false
to fit biobrick assembly rules
false
Shang-Jui Tsai
annotation2148470
1
rLuc
range2148470
1
373
1758
annotation2148471
1
stop
range2148471
1
1759
1761
annotation2148469
1
start
range2148469
1
1
3
annotation2148468
1
mms13
range2148468
1
4
372
BBa_K624004
1
BBa_K624004
ori+Pmsp1+rep (pYMB essentials)
2011-09-29T11:00:00Z
2015-05-08T01:12:55Z
Express in AMB-1
Released HQ 2013
express in AMB-1
false
false
_796_
0
6664
9
In stock
false
Express in AMB-1
false
SHANG-JUI TSAI, CHUN-YU LAI
component2148123
1
BBa_K624003
component2148120
1
BBa_K624000
annotation2148120
1
BBa_K624000
range2148120
1
1
277
annotation2148123
1
BBa_K624003
range2148123
1
286
1142
BBa_K624025
1
BBa_K624025
CHAMP-EYFP
2011-10-03T11:00:00Z
2015-05-08T01:12:55Z
synthetic CHAMP DNA, EYFP extracted from parts registry
inhibitor CHAMP with BRET receptor protein EYFP fused on its C-terminal
false
false
_796_
0
9029
9
It's complicated
false
to fit biobrick assembly standards.
false
Shang-Jui Tsai
annotation2151924
1
BBa_K624010
range2151924
1
1
57
annotation2151925
1
start
range2151925
1
1
3
annotation2151927
1
BBa_E0030
range2151927
1
58
780
annotation2151926
1
CHAMP (anti-H1[mms13])
range2151926
1
4
57
BBa_K624012
1
BBa_K624012
RBS from Pmsp3
2011-10-01T11:00:00Z
2015-05-08T01:12:55Z
synthetic DNA
predicted RBS site from Pmsp3, the strongest promoter of Magnetospirillum magneticum AMB-1
false
false
_796_
0
9029
9
Not in stock
false
to fit biobrick assembly rules
false
Shang-Jui Tsai
annotation2148845
1
artificial start codon
range2148845
1
29
31
annotation2148844
1
rbs (from Pmsp3)
range2148844
1
1
28
BBa_K624000
1
BBa_K624000
ori+Pmsp1
2011-09-29T11:00:00Z
2015-05-08T01:12:55Z
express
Released HQ 2013
express
false
false
_796_
0
6664
9
In stock
false
express
false
SHANG-JUI TSAI, CHUN-YU LAI
annotation2148113
1
Pmsp1
range2148113
1
81
274
annotation2148114
1
start
range2148114
1
275
277
annotation2148112
1
ori (pMGT)
range2148112
1
1
80
BBa_K624030_sequence
1
tgatccgccagcgccgaagccatcataactgcattgaataattcaaagtgcattgaataaggcagggtgcataaggcgcagcggtaacgccgcctcgccggtggaagggtgttgtgtggcatccatgccacagtgcggagttttcgatacagccgacgtcccgcctcgcttgactggcggcgcccatcatggcgtgatggcgaccgttcgttcatttggatagcggtcgcggccattgggggtcgttttcgcaaagccaaagagaggagataccatgtactagagcgggagagggagctgatcccgctgatggtgacgctgacaggccatcacaatgcacggatgagcctcgctgaatgtctgacggtgatgaagaaggccaagcagagccttcaccagtctggcccatggaagcgccatgttggcccggtggtcgaagggcacgtcacggcaacggaggtcaatcggtcacgccgccatggctggcacgtccattttcacgtcctgatgctgattgaggccgccagcgaggccgaagcgattgcgctcgtgacccgacacctcgaacctgaatggctccggcagcttgagcgccaaggcagctggggcggcgaacatgcgttagacgtccagggcgcagccgatgcggatcggtatgtggccaagtggggcgcggctgaggaattggctctgtcgggcgaaaagcgggcgcgcggcgacgccgaaattaagggtcaaacgccgtgggaattgttggccgctgcggctgatggtgacgtccaggctggccgcgattttgtggagtacgcgaccctgtttcatggcaaacgccagctcgtttggtcgcgaggactgaaagagcgtgtcggcctcaaggtggtggaagacgacgaggccgccggcgagctggaggatgtcgcagatagcgccatcaacgaagtggccgtgttgccgaggccgacttggcgtcacatcgtccggcgcaggctccgcgcggatctgctggccgccgctcgtgatgacggattcgatggcgtcgcgcggctgctcaatgagcatggcatcggcggagctatgcccggcggctggcgaccaatgcttagcgaatataccgagcatattgcgatggctgcgtgactctttactagaggtccaagccctatgagggagcctttctaatgtactagatgcccgaaggctacgtccaggagcgcaccatcttcttcaaggacgacggcaactacaagacccgcgccgaggtgaagttcgagggcgacaccctggtgaaccgcatcgagctgaagggcatcgacttcaaggaggacggcaacatcctggggcacaagctggagtacaactacaacagccacaacgtctatatcatggccgacaagcagaagaacggcatcaaggtgaacttcaagatccgccacaacatcgaggacggcagcgtgcagctcgccgaccactaccagcagaacacccccatcggcgacggccccgtgctgctgcccgacaaccactacctgagctaccagtccgccctgagcaaagaccccaacgagaagcgcgatcacatggtcctgctggagttcgtgaccgccgccgggatcactctcggcatggacgagctgtacaagatgccctttcaccttgccccctatctggcgaaatccgttcccggcgtcggcgttctcggcgccctggtcggcggcgccgccgccttggccaagaacgtccgcctcctgaaggaaaagcgcatcaccaataccgaagcggccatcgataccggcaaggaaaccgtcggcgccggcctggccaccgcgctttccgccgtggccgcgaccgccgtcggcggcggcctggttgtatcgctgggcaccgccttggtggccggcgttgccgccaaatatgcctgggatcgcggcgtcgatctggtcgagaaggaactgaaccgcggcaaagctgccaacggcgcttccgacgaggacatcttgcgggacgaactggccatggcttccaaggtgtacgaccccgagcaacgcaaacgcatgatcactgggcctcagtggtgggctcgctgcaagcaaatgaacgtgctggactccttcatcaactactatgattccgagaagcacgccgagaacgccgtgatttttctgcatggtaacgctgcctccagctacctgtggaggcacgtcgtgcctcacatcgagcccgtggctagatgcatcatccctgatctgatcggaatgggtaagtccggcaagagcgggaatggctcatatcgcctcctggatcactacaagtacctcaccgcttggttcgagctgctgaaccttccaaagaaaatcatctttgtgggccacgactggggggcttgtctggcctttcactactcctacgagcaccaagacaagatcaaggccatcgtccatgctgagagtgtcgtggacgtgatcgagtcctgggacgagtggcctgacatcgaggaggatatcgccctgatcaagagcgaagagggcgagaaaatggtgcttgagaataacttcttcgtcgagaccatgctcccaagcaagatcatgcggaaactggagcctgaggagttcgctgcctacctggagccattcaaggagaagggcgaggttagacggcctaccctctcctggcctcgcgagatccctctcgttaagggaggcaagcccgacgtcgtccagattgtccgcaactacaacgcctaccttcgggccagcgacgatctgcctaagatgttcatcgagtccgaccctgggttcttttccaacgctattgtcgagggagctaagaagttccctaacaccgagttcgtgaaggtgaagggcctccacttcagccaggaggacgctccagatgaaatgggtaagtacatcaagagcttcgtggagcgcgtgctgaagaacgagcagtaatactagaggtccaagccctatgagggagcctttctaatgtactagatgaagaagctgttcgtgctgctgatgttcatcatcgtggccctgctgtggaagaagatggtgagcaagggcgaggagctgttcaccggggtggtgcccatcctggtcgagctggacggcgacgtaaacggccacaagttcagcgtgtccggcgagggcgagggcgatgccacctacggcaagctgaccctgaagttcatctgcaccaccggcaagctgcccgtgccctggcccaccctcgtgaccaccttcggctacggcctgcaatgcttcgcccgctaccccgaccacatgaagctgcacgacttcttcaagtccgccatgcccgaaggctacgtccaggagcgcaccatcttcttcaaggacgacggcaactacaagacccgcgccgaggtgaagttcgagggcgacaccctggtgaaccgcatcgagctgaagggcatcgacttcaaggaggacggcaacatcctggggcacaagctggagtacaactacaacagccacaacgtctatatcatggccgacaagcagaagaacggcatcaaggtgaacttcaagatccgccacaacatcgaggacggcagcgtgcagctcgccgaccactaccagcagaacacccccatcggcgacggccccgtgctgctgcccgacaaccactacctgagctaccagtccgccctgagcaaagaccccaacgagaagcgcgatcacatggtcctgctggagttcgtgaccgccgccgggatcactctcggcatggacgagctgtacaagtaataa
BBa_K624007_sequence
1
atgcccgaaggctacgtccaggagcgcaccatcttcttcaaggacgacggcaactacaagacccgcgccgaggtgaagttcgagggcgacaccctggtgaaccgcatcgagctgaagggcatcgacttcaaggaggacggcaacatcctggggcacaagctggagtacaactacaacagccacaacgtctatatcatggccgacaagcagaagaacggcatcaaggtgaacttcaagatccgccacaacatcgaggacggcagcgtgcagctcgccgaccactaccagcagaacacccccatcggcgacggccccgtgctgctgcccgacaaccactacctgagctaccagtccgccctgagcaaagaccccaacgagaagcgcgatcacatggtcctgctggagttcgtgaccgccgccgggatcactctcggcatggacgagctgtacaagatgccctttcaccttgccccctatctggcgaaatccgttcccggcgtcggcgttctcggcgccctggtcggcggcgccgccgccttggccaagaacgtccgcctcctgaaggaaaagcgcatcaccaataccgaagcggccatcgataccggcaaggaaaccgtcggcgccggcctggccaccgcgctttccgccgtggccgcgaccgccgtcggcggcggcctggttgtatcgctgggcaccgccttggtggccggcgttgccgccaaatatgcctgggatcgcggcgtcgatctggtcgagaaggaactgaaccgcggcaaagctgccaacggcgcttccgacgaggacatcttgcgggacgaactggccatggcttccaaggtgtacgaccccgagcaacgcaaacgcatgatcactgggcctcagtggtgggctcgctgcaagcaaatgaacgtgctggactccttcatcaactactatgattccgagaagcacgccgagaacgccgtgatttttctgcatggtaacgctgcctccagctacctgtggaggcacgtcgtgcctcacatcgagcccgtggctagatgcatcatccctgatctgatcggaatgggtaagtccggcaagagcgggaatggctcatatcgcctcctggatcactacaagtacctcaccgcttggttcgagctgctgaaccttccaaagaaaatcatctttgtgggccacgactggggggcttgtctggcctttcactactcctacgagcaccaagacaagatcaaggccatcgtccatgctgagagtgtcgtggacgtgatcgagtcctgggacgagtggcctgacatcgaggaggatatcgccctgatcaagagcgaagagggcgagaaaatggtgcttgagaataacttcttcgtcgagaccatgctcccaagcaagatcatgcggaaactggagcctgaggagttcgctgcctacctggagccattcaaggagaagggcgaggttagacggcctaccctctcctggcctcgcgagatccctctcgttaagggaggcaagcccgacgtcgtccagattgtccgcaactacaacgcctaccttcgggccagcgacgatctgcctaagatgttcatcgagtccgaccctgggttcttttccaacgctattgtcgagggagctaagaagttccctaacaccgagttcgtgaaggtgaagggcctccacttcagccaggaggacgctccagatgaaatgggtaagtacatcaagagcttcgtggagcgcgtgctgaagaacgagcagtaa
BBa_K624000_sequence
1
tgatccgccagcgccgaagccatcataactgcattgaataattcaaagtgcattgaataaggcagggtgcataaggcgcagcggtaacgccgcctcgccggtggaagggtgttgtgtggcatccatgccacagtgcggagttttcgatacagccgacgtcccgcctcgcttgactggcggcgcccatcatggcgtgatggcgaccgttcgttcatttggatagcggtcgcggccattgggggtcgttttcgcaaagccaaagagaggagataccatg
BBa_K624012_sequence
1
gtccaagccctatgagggagcctttctaatg
BBa_K624025_sequence
1
atgaagaagctgttcgtgctgctgatgttcatcatcgtggccctgctgtggaagaagatggtgagcaagggcgaggagctgttcaccggggtggtgcccatcctggtcgagctggacggcgacgtaaacggccacaagttcagcgtgtccggcgagggcgagggcgatgccacctacggcaagctgaccctgaagttcatctgcaccaccggcaagctgcccgtgccctggcccaccctcgtgaccaccttcggctacggcctgcaatgcttcgcccgctaccccgaccacatgaagctgcacgacttcttcaagtccgccatgcccgaaggctacgtccaggagcgcaccatcttcttcaaggacgacggcaactacaagacccgcgccgaggtgaagttcgagggcgacaccctggtgaaccgcatcgagctgaagggcatcgacttcaaggaggacggcaacatcctggggcacaagctggagtacaactacaacagccacaacgtctatatcatggccgacaagcagaagaacggcatcaaggtgaacttcaagatccgccacaacatcgaggacggcagcgtgcagctcgccgaccactaccagcagaacacccccatcggcgacggccccgtgctgctgcccgacaaccactacctgagctaccagtccgccctgagcaaagaccccaacgagaagcgcgatcacatggtcctgctggagttcgtgaccgccgccgggatcactctcggcatggacgagctgtacaagtaataa
BBa_K624004_sequence
1
tgatccgccagcgccgaagccatcataactgcattgaataattcaaagtgcattgaataaggcagggtgcataaggcgcagcggtaacgccgcctcgccggtggaagggtgttgtgtggcatccatgccacagtgcggagttttcgatacagccgacgtcccgcctcgcttgactggcggcgcccatcatggcgtgatggcgaccgttcgttcatttggatagcggtcgcggccattgggggtcgttttcgcaaagccaaagagaggagataccatgtactagagcgggagagggagctgatcccgctgatggtgacgctgacaggccatcacaatgcacggatgagcctcgctgaatgtctgacggtgatgaagaaggccaagcagagccttcaccagtctggcccatggaagcgccatgttggcccggtggtcgaagggcacgtcacggcaacggaggtcaatcggtcacgccgccatggctggcacgtccattttcacgtcctgatgctgattgaggccgccagcgaggccgaagcgattgcgctcgtgacccgacacctcgaacctgaatggctccggcagcttgagcgccaaggcagctggggcggcgaacatgcgttagacgtccagggcgcagccgatgcggatcggtatgtggccaagtggggcgcggctgaggaattggctctgtcgggcgaaaagcgggcgcgcggcgacgccgaaattaagggtcaaacgccgtgggaattgttggccgctgcggctgatggtgacgtccaggctggccgcgattttgtggagtacgcgaccctgtttcatggcaaacgccagctcgtttggtcgcgaggactgaaagagcgtgtcggcctcaaggtggtggaagacgacgaggccgccggcgagctggaggatgtcgcagatagcgccatcaacgaagtggccgtgttgccgaggccgacttggcgtcacatcgtccggcgcaggctccgcgcggatctgctggccgccgctcgtgatgacggattcgatggcgtcgcgcggctgctcaatgagcatggcatcggcggagctatgcccggcggctggcgaccaatgcttagcgaatataccgagcatattgcgatggctgcgtgactctt
BBa_K624003_sequence
1
cgggagagggagctgatcccgctgatggtgacgctgacaggccatcacaatgcacggatgagcctcgctgaatgtctgacggtgatgaagaaggccaagcagagccttcaccagtctggcccatggaagcgccatgttggcccggtggtcgaagggcacgtcacggcaacggaggtcaatcggtcacgccgccatggctggcacgtccattttcacgtcctgatgctgattgaggccgccagcgaggccgaagcgattgcgctcgtgacccgacacctcgaacctgaatggctccggcagcttgagcgccaaggcagctggggcggcgaacatgcgttagacgtccagggcgcagccgatgcggatcggtatgtggccaagtggggcgcggctgaggaattggctctgtcgggcgaaaagcgggcgcgcggcgacgccgaaattaagggtcaaacgccgtgggaattgttggccgctgcggctgatggtgacgtccaggctggccgcgattttgtggagtacgcgaccctgtttcatggcaaacgccagctcgtttggtcgcgaggactgaaagagcgtgtcggcctcaaggtggtggaagacgacgaggccgccggcgagctggaggatgtcgcagatagcgccatcaacgaagtggccgtgttgccgaggccgacttggcgtcacatcgtccggcgcaggctccgcgcggatctgctggccgccgctcgtgatgacggattcgatggcgtcgcgcggctgctcaatgagcatggcatcggcggagctatgcccggcggctggcgaccaatgcttagcgaatataccgagcatattgcgatggctgcgtgactctt
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z