BBa_C0070
1
rhII
autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
2004-01-26T12:00:00Z
2015-08-31T04:07:23Z
P. aeruginosa PA3476
Released HQ 2013
Autoinducer synthesis protein that produces N-butyryl-HSL which binds to RhlR, obtained from Pseudomonas aeruginosa.
false
false
_1_
0
24
7
In stock
false
Editing Check (1/28/04)
(0) BB sites cleaned
(1) ATG
(2) TAATAA
(3) Blast checks out (i.e., it's RhlI)
(4) Codon changes OK (AA and tRNA usage)
(5) Chassis might have conflict (w/ native autoinducer system?)
(6) ssrA tag added
(7) barcode added
(8) Codon optimized for expression in enteric bacteria
<P>
2 silent point mutations have been included into the sequence at base 138 from A to G and at base 576 from G to C to remove internal EcoRI and PstI sites. Mutations were chosen to yield the same amino acid and codons of similar frequency in E. coli.
true
Debra Lin, Srini Devadas, David Gray, Ronny Krashinsky, and Chris Zheng Liu, Boopers
annotation301203
1
rhlL
range301203
1
1
603
annotation306820
1
LVA
range306820
1
604
636
annotation2213996
1
Help:Barcodes
range2213996
1
643
667
BBa_K726008
1
BBa_K726008
T7 driven lac operated inducer for the rhl quorum-sensing system
2012-08-09T11:00:00Z
2015-05-08T01:13:05Z
The inducer is from the parts registry. The T7 promoter and lac operator is from the plasmid pCDFDuet from Novagen.
Produces the chemical signal N-butyryl-HSL. Induces pRhl with the regulatory protein RhlR. Requires the T7 RNA polymerase and inducable by the lactose.
false
true
_972_
0
10304
9
Not in stock
false
None.
false
Sami Chu
component2244971
1
BBa_C0070
component2244967
1
BBa_K726003
annotation2244971
1
BBa_C0070
range2244971
1
136
802
annotation2244967
1
BBa_K726003
range2244967
1
1
129
BBa_K726003
1
BBa_K726003
T7 promoter + lac operator + His tag
2012-08-08T11:00:00Z
2015-05-08T01:13:05Z
The sequence is from pCDFDuet from Novagen.
T7 promoter is good for protein expression in <i>e. coli</i>. Requires the T7 RNA polymerase. Also contains a RBS, and a His tag for protein purification. Insert your protein of interest behind this.
false
false
_972_
0
10304
9
Not in stock
false
none.
false
Sami Chu
annotation2179385
1
His tag
range2179385
1
100
117
annotation2179384
1
T7 promoter
range2179384
1
1
17
annotation2179473
1
lac operator
range2179473
1
22
42
BBa_K726008_sequence
1
taatacgactcactataggggaattgtgagcggataacaattcccctgtagaaataattttgtttaactttaataaggagatataccatgggcagcagccatcaccatcatcaccacagccaggatccgtactagatgatcgaactgctgtccgaatccctggaaggtctgtccgctgctatgatcgctgaactgggtcgttaccgtcaccaggttttcatcgaaaaactgggttgggacgttgtttccacctcccgtgttcgtgaccaggagttcgaccagttcgaccacccgcagacccgttacatcgttgctatgtcccgtcagggtatctgcggttgcgctcgtctgctgccgaccaccgacgcttacctgctgaaagacgttttcgcttacctgtgctccgaaaccccgccgtccgacccgtccgtttgggaactgtcccgttacgctgcttccgctgctgacgacccgcagctggctatgaaaatcttctggtcctccctccagtgcgcttggtacctgggtgcttcctccgttgttgctgttaccaccaccgctatggaacgttacttcgttcgtaacggtgttatcctccagcgtctgggtccgccgcagaaagttaaaggtgaaaccctggttgctatctccttcccggcttaccaggaacgtggtctggaaatgctgctgcgttaccacccggaatggctccagggtgttccgctgtccatggctgttgctgcaaacgacgaaaactacgctttagtagcttaataactctgatagtgctagtgtagatctc
BBa_C0070_sequence
1
atgatcgaactgctgtccgaatccctggaaggtctgtccgctgctatgatcgctgaactgggtcgttaccgtcaccaggttttcatcgaaaaactgggttgggacgttgtttccacctcccgtgttcgtgaccaggagttcgaccagttcgaccacccgcagacccgttacatcgttgctatgtcccgtcagggtatctgcggttgcgctcgtctgctgccgaccaccgacgcttacctgctgaaagacgttttcgcttacctgtgctccgaaaccccgccgtccgacccgtccgtttgggaactgtcccgttacgctgcttccgctgctgacgacccgcagctggctatgaaaatcttctggtcctccctccagtgcgcttggtacctgggtgcttcctccgttgttgctgttaccaccaccgctatggaacgttacttcgttcgtaacggtgttatcctccagcgtctgggtccgccgcagaaagttaaaggtgaaaccctggttgctatctccttcccggcttaccaggaacgtggtctggaaatgctgctgcgttaccacccggaatggctccagggtgttccgctgtccatggctgttgctgcaaacgacgaaaactacgctttagtagcttaataactctgatagtgctagtgtagatctc
BBa_K726003_sequence
1
taatacgactcactataggggaattgtgagcggataacaattcccctgtagaaataattttgtttaactttaataaggagatataccatgggcagcagccatcaccatcatcaccacagccaggatccg
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z