BBa_K764023
1
BBa_K764023
Cyclodextrin glycosyltransferase
2012-09-15T11:00:00Z
2015-05-08T01:13:13Z
GenBank accession number and the paper reference
Gene encoding Cyclodextrin
false
false
_1015_
0
12505
9
In stock
false
Synthesised with the correct biobrick primers
false
Frederic Dudbridge
BBa_B0011
1
BBa_B0011
LuxICDABEG (+/-)
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Derived from luxICDABEG operon terminator of Vibrio fischeri <genbank>AF170104</genbank>.
Released HQ 2013
Bidirectional transcriptional terminator consisting of a 22 bp stem-loop.</p>
false
false
_1_
0
24
7
In stock
false
<P> <P>In the naturally-occuring sequence there is a mismatch in the stem of the stem loop. This can be corrected via an A->G mutation (at position 40 -- sequence coordinate/not MFOLD coordinate). The above sequence does not reflect this mutation (but the MFOLD image does). This terminator's location cannot be found using some inverted repeat detectors like PALINDROME because it is too short and contains a mismatch. This one was found with the help of Tom Knight. It lies between two coding regions that point towards eachother.<P>
true
Reshma Shetty
annotation7019
1
BBa_B0011
range7019
1
1
46
annotation1683
1
stem_loop
range1683
1
13
35
BBa_B0012
1
BBa_B0012
TE from coliphageT7
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Derived from the TE terminator of T7 bacteriophage between Genes 1.3 and 1.4 <genbank>V01146</genbank>.
Released HQ 2013
Transcription terminator for the <i>E.coli</i> RNA polymerase.
false
false
_1_
0
24
7
In stock
false
<P> <P>Suggested by Sri Kosuri and Drew Endy as a high efficiency terminator. The 5' end cutoff was placed immediately after the TAA stop codon and the 3' end cutoff was placed just prior to the RBS of Gene 1.4 (before AAGGAG).<P> Use anywhere transcription should be stopped when the gene of interest is upstream of this terminator.
false
Reshma Shetty
annotation7020
1
BBa_B0012
range7020
1
1
41
annotation1687
1
stop
range1687
1
34
34
annotation1690
1
polya
range1690
1
28
41
annotation1686
1
T7 TE
range1686
1
8
27
BBa_B0014
1
BBa_B0014
double terminator (B0012-B0011)
2003-07-15T11:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
Double terminator consisting of BBa_B0012 and BBa_B0011
false
true
_1_
0
24
7
In stock
false
true
Reshma Shetty
component939311
1
BBa_B0011
component939303
1
BBa_B0012
annotation939303
1
BBa_B0012
range939303
1
1
41
annotation939311
1
BBa_B0011
range939311
1
50
95
BBa_K764026
1
BBa_K764026
Cyclodextrin glycosyltransferase + BBa_B0014
2012-09-15T11:00:00Z
2015-05-08T01:13:14Z
<partinfo>BBa_K764023</partinfo> + <partinfo> BBa_B0014</partinfo>
Gene encoding Cyclodextrin glycosyltransferas with terminator attached
false
false
_1015_
0
12505
9
It's complicated
false
3A assembly
false
Frederic Dudbridge
component2202456
1
BBa_K764023
component2202463
1
BBa_B0014
annotation2202463
1
BBa_B0014
range2202463
1
750
844
annotation2202456
1
BBa_K764023
range2202456
1
1
741
BBa_B0014_sequence
1
tcacactggctcaccttcgggtgggcctttctgcgtttatatactagagagagaatataaaaagccagattattaatccggcttttttattattt
BBa_K764023_sequence
1
atgatttcagtgattatgtgcattaacaaatacgattcctatgtcatgccagctatcaactctattctgaaccagacctataagaagtatgaattgattatcgtcgcgaatggtaacgaggcgtctgacattgcgcgcgttctgaaaaacaacatcaagcagaccgagaacgttaacatcattgaaaccaacattggccaactggccttcagcctgaacctggcgatcagcaaggctaaatacgacattatcgcccgcatggacagcgacgatattgcattgccgaatcgtctgcaaaagcaaatcaaatatctgatcgacaatgagctggatttgatcggtacgagcattaatctgattgatgagaatgacggttttctgggtgtgcgtctgtaccctcgccagaagctgatcaatcgttacattatgttccgtaattgtttcgcacacccgagcatcatgtttcgtaaagatctgtttctgaaaacccgtggctacaatggcggtttcaacagcgaggactacgacctgtggctgcgtatgcgtagcctgaagccgcgctgggataacatggaagaaccgctgctgaattatcgtgttcatagcaatagcactcagaagtcgaaattggcgtactacgaatgtgcaggctacagcttgcgcgagttcctgaaaaagaaatccatcatgagctttctgagctgcacgtatcactttatcaaggcgctggtgaaataataa
BBa_K764026_sequence
1
atgatttcagtgattatgtgcattaacaaatacgattcctatgtcatgccagctatcaactctattctgaaccagacctataagaagtatgaattgattatcgtcgcgaatggtaacgaggcgtctgacattgcgcgcgttctgaaaaacaacatcaagcagaccgagaacgttaacatcattgaaaccaacattggccaactggccttcagcctgaacctggcgatcagcaaggctaaatacgacattatcgcccgcatggacagcgacgatattgcattgccgaatcgtctgcaaaagcaaatcaaatatctgatcgacaatgagctggatttgatcggtacgagcattaatctgattgatgagaatgacggttttctgggtgtgcgtctgtaccctcgccagaagctgatcaatcgttacattatgttccgtaattgtttcgcacacccgagcatcatgtttcgtaaagatctgtttctgaaaacccgtggctacaatggcggtttcaacagcgaggactacgacctgtggctgcgtatgcgtagcctgaagccgcgctgggataacatggaagaaccgctgctgaattatcgtgttcatagcaatagcactcagaagtcgaaattggcgtactacgaatgtgcaggctacagcttgcgcgagttcctgaaaaagaaatccatcatgagctttctgagctgcacgtatcactttatcaaggcgctggtgaaataataatactagagtcacactggctcaccttcgggtgggcctttctgcgtttatatactagagagagaatataaaaagccagattattaatccggcttttttattattt
BBa_B0011_sequence
1
agagaatataaaaagccagattattaatccggcttttttattattt
BBa_B0012_sequence
1
tcacactggctcaccttcgggtgggcctttctgcgtttata
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z