BBa_B0034
1
BBa_B0034
RBS (Elowitz 1999) -- defines RBS efficiency
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
RBS based on Elowitz repressilator.
false
true
_1_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS.
Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation23325
1
conserved
range23325
1
5
8
BBa_B0012
1
BBa_B0012
TE from coliphageT7
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Derived from the TE terminator of T7 bacteriophage between Genes 1.3 and 1.4 <genbank>V01146</genbank>.
Released HQ 2013
Transcription terminator for the <i>E.coli</i> RNA polymerase.
false
false
_1_
0
24
7
In stock
false
<P> <P>Suggested by Sri Kosuri and Drew Endy as a high efficiency terminator. The 5' end cutoff was placed immediately after the TAA stop codon and the 3' end cutoff was placed just prior to the RBS of Gene 1.4 (before AAGGAG).<P> Use anywhere transcription should be stopped when the gene of interest is upstream of this terminator.
false
Reshma Shetty
annotation1690
1
polya
range1690
1
28
41
annotation7020
1
BBa_B0012
range7020
1
1
41
annotation1686
1
T7 TE
range1686
1
8
27
annotation1687
1
stop
range1687
1
34
34
BBa_K769100
1
BBa_K769100
luxA
2012-09-18T11:00:00Z
2015-05-08T01:13:14Z
Photobacterium kishitanii strain NCMB 844 lux-rib operon
luxA
false
false
_1021_
0
14229
9
Not in stock
false
luxA
false
Mayumi Nakamura
BBa_K769013
1
BBa_K769013
Promoter(Pbad)-RBS-luxA-DT
2012-09-18T11:00:00Z
2015-05-08T01:13:14Z
Photobacterium kishitanii strain NCMB 844 lux-rib operon
Promoter(Pbad)-RBS-luxA-DT
false
false
_1021_
0
14229
9
Not in stock
false
Promoter(Pbad)-RBS-luxA-DT
false
Mayumi Nakamura
component2186543
1
BBa_B0034
component2186551
1
BBa_B0015
component2186541
1
BBa_I0500
component2186544
1
BBa_K769100
annotation2186551
1
BBa_B0015
range2186551
1
2319
2447
annotation2186541
1
BBa_I0500
range2186541
1
1
1210
annotation2186543
1
BBa_B0034
range2186543
1
1219
1230
annotation2186544
1
BBa_K769100
range2186544
1
1237
2310
BBa_I0500
1
pBad/araC
Inducible pBad/araC promoter
2003-12-05T12:00:00Z
2015-08-31T04:07:29Z
-- No description --
false
true
_1_
0
24
7
In stock
false
true
Sri Kosuri
annotation1498841
1
Pbad
range1498841
1
1080
1210
annotation1498843
1
AraC
range1498843
1
1
1079
annotation1498842
1
PC
range1498842
1
1043
1114
BBa_B0010
1
BBa_B0010
T1 from E. coli rrnB
2003-11-19T12:00:00Z
2015-08-31T04:07:20Z
Transcriptional terminator consisting of a 64 bp stem-loop.
false
false
_1_
0
24
7
In stock
false
true
Randy Rettberg
annotation7018
1
BBa_B0010
range7018
1
1
80
annotation4184
1
stem_loop
range4184
1
12
55
BBa_B0015
1
BBa_B0015
double terminator (B0010-B0012)
2003-07-16T11:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
Double terminator consisting of BBa_B0010 and BBa_B0012
false
true
_1_
0
24
7
In stock
false
true
Reshma Shetty
component1916610
1
BBa_B0010
component1916612
1
BBa_B0012
annotation1916610
1
BBa_B0010
range1916610
1
1
80
annotation1916612
1
BBa_B0012
range1916612
1
89
129
BBa_B0010_sequence
1
ccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctc
BBa_K769013_sequence
1
ttatgacaacttgacggctacatcattcactttttcttcacaaccggcacggaactcgctcgggctggccccggtgcattttttaaatacccgcgagaaatagagttgatcgtcaaaaccaacattgcgaccgacggtggcgataggcatccgggtggtgctcaaaagcagcttcgcctggctgatacgttggtcctcgcgccagcttaagacgctaatccctaactgctggcggaaaagatgtgacagacgcgacggcgacaagcaaacatgctgtgcgacgctggcgatatcaaaattgctgtctgccaggtgatcgctgatgtactgacaagcctcgcgtacccgattatccatcggtggatggagcgactcgttaatcgcttccatgcgccgcagtaacaattgctcaagcagatttatcgccagcagctccgaatagcgcccttccccttgcccggcgttaatgatttgcccaaacaggtcgctgaaatgcggctggtgcgcttcatccgggcgaaagaaccccgtattggcaaatattgacggccagttaagccattcatgccagtaggcgcgcggacgaaagtaaacccactggtgataccattcgcgagcctccggatgacgaccgtagtgatgaatctctcctggcgggaacagcaaaatatcacccggtcggcaaacaaattctcgtccctgatttttcaccaccccctgaccgcgaatggtgagattgagaatataacctttcattcccagcggtcggtcgataaaaaaatcgagataaccgttggcctcaatcggcgttaaacccgccaccagatgggcattaaacgagtatcccggcagcaggggatcattttgcgcttcagccatacttttcatactcccgccattcagagaagaaaccaattgtccatattgcatcagacattgccgtcactgcgtcttttactggctcttctcgctaaccaaaccggtaaccccgcttattaaaagcattctgtaacaaagcgggaccaaagccatgacaaaaacgcgtaacaaaagtgtctataatcacggcagaaaagtccacattgattatttgcacggcgtcacactttgctatgccatagcatttttatccataagattagcggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttgggctagctactagagaaagaggagaaatactagatgaagtttggaaatatttgtttctcatatcagcctccaggtgagtcacataaagaagtcatggatcgctttgttcgtttaggcgttgcatcagaagaactaaattttgatacttactggactctcgagcatcattttactgaatttggactaacaggtaacctgtttgttgcttgtgctaacttacttggtcgaaccaccaaactgaatgttggtactatgggtattgttcttccaacagctcaccctgcacgtcagatggaagatttattacttttagatcaaatgtcaaaaggccgttttaattttggtgttgtgcgtggcttgtaccacaaagatttccgcgtttttggtgtaacgatggaagattctcgtgctatcactgaagattttcacaccatgattatggatggtacaaaaacaggtacacttcatactgatggtaaaaacatcgagttcccagatgtaaacgtttacccagaggcgtatttagagaaaattccaacatgcatgactgctgaatcagcagtaacaacgacttggcttgctgagcgtggcttaccgatggttcttagttggattattacaacgagtgaaaagaaagctcaaatggaactctataatgctgttgctcgagatagcggttacagtgaagagtacattaaaaacgttgatcacagtatgaccctcatctgttctgtagatgaagatggcaaaaaagctgaagatgtgtgccgtgagtttttaggtaattggtatgattcatacgtaaatgcaaccaatatctttagtgaaagtaaccaaactcgtggttatgattatcataaaggtcaatggaaagattttgttcttcaaggacatactaatactaaacgtcgtgttgattatagcaacgatctaaaccctgtaggtacacctgaaaaatgtattgaaattattcagcgtgatattgatgcaacaggtattactaatattacccttggtttcgaagcaaatggctctgaggaagaaatcattgcctctatgaaacgcttcatgacgcaagttgcaccattcttaaaagatccaaaataatactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_B0034_sequence
1
aaagaggagaaa
BBa_I0500_sequence
1
ttatgacaacttgacggctacatcattcactttttcttcacaaccggcacggaactcgctcgggctggccccggtgcattttttaaatacccgcgagaaatagagttgatcgtcaaaaccaacattgcgaccgacggtggcgataggcatccgggtggtgctcaaaagcagcttcgcctggctgatacgttggtcctcgcgccagcttaagacgctaatccctaactgctggcggaaaagatgtgacagacgcgacggcgacaagcaaacatgctgtgcgacgctggcgatatcaaaattgctgtctgccaggtgatcgctgatgtactgacaagcctcgcgtacccgattatccatcggtggatggagcgactcgttaatcgcttccatgcgccgcagtaacaattgctcaagcagatttatcgccagcagctccgaatagcgcccttccccttgcccggcgttaatgatttgcccaaacaggtcgctgaaatgcggctggtgcgcttcatccgggcgaaagaaccccgtattggcaaatattgacggccagttaagccattcatgccagtaggcgcgcggacgaaagtaaacccactggtgataccattcgcgagcctccggatgacgaccgtagtgatgaatctctcctggcgggaacagcaaaatatcacccggtcggcaaacaaattctcgtccctgatttttcaccaccccctgaccgcgaatggtgagattgagaatataacctttcattcccagcggtcggtcgataaaaaaatcgagataaccgttggcctcaatcggcgttaaacccgccaccagatgggcattaaacgagtatcccggcagcaggggatcattttgcgcttcagccatacttttcatactcccgccattcagagaagaaaccaattgtccatattgcatcagacattgccgtcactgcgtcttttactggctcttctcgctaaccaaaccggtaaccccgcttattaaaagcattctgtaacaaagcgggaccaaagccatgacaaaaacgcgtaacaaaagtgtctataatcacggcagaaaagtccacattgattatttgcacggcgtcacactttgctatgccatagcatttttatccataagattagcggatcctacctgacgctttttatcgcaactctctactgtttctccatacccgtttttttgggctagc
BBa_K769100_sequence
1
atgaagtttggaaatatttgtttctcatatcagcctccaggtgagtcacataaagaagtcatggatcgctttgttcgtttaggcgttgcatcagaagaactaaattttgatacttactggactctcgagcatcattttactgaatttggactaacaggtaacctgtttgttgcttgtgctaacttacttggtcgaaccaccaaactgaatgttggtactatgggtattgttcttccaacagctcaccctgcacgtcagatggaagatttattacttttagatcaaatgtcaaaaggccgttttaattttggtgttgtgcgtggcttgtaccacaaagatttccgcgtttttggtgtaacgatggaagattctcgtgctatcactgaagattttcacaccatgattatggatggtacaaaaacaggtacacttcatactgatggtaaaaacatcgagttcccagatgtaaacgtttacccagaggcgtatttagagaaaattccaacatgcatgactgctgaatcagcagtaacaacgacttggcttgctgagcgtggcttaccgatggttcttagttggattattacaacgagtgaaaagaaagctcaaatggaactctataatgctgttgctcgagatagcggttacagtgaagagtacattaaaaacgttgatcacagtatgaccctcatctgttctgtagatgaagatggcaaaaaagctgaagatgtgtgccgtgagtttttaggtaattggtatgattcatacgtaaatgcaaccaatatctttagtgaaagtaaccaaactcgtggttatgattatcataaaggtcaatggaaagattttgttcttcaaggacatactaatactaaacgtcgtgttgattatagcaacgatctaaaccctgtaggtacacctgaaaaatgtattgaaattattcagcgtgatattgatgcaacaggtattactaatattacccttggtttcgaagcaaatggctctgaggaagaaatcattgcctctatgaaacgcttcatgacgcaagttgcaccattcttaaaagatccaaaataa
BBa_B0012_sequence
1
tcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_B0015_sequence
1
ccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z