BBa_K784027
1
BBa_K784027
XhoI+RBS+Alkaline Phosphatase (phoA) +XmaI
2012-09-16T11:00:00Z
2015-05-08T01:13:22Z
the RBS and phoA part are from the parts registry
this part consist of an XhoI restriction site, an RBS part, the phoA part and XmaI restriction site.
false
false
_1039_
0
11982
9
Not in stock
false
we made XhoI and XmaI sites on both sides in order to make ligation with this part
false
Lior Levy
annotation2183986
1
XmaI restriction site
range2183986
1
1494
1499
annotation2183980
1
XhoI restriction site
range2183980
1
1
6
annotation2183982
1
RBS BioBrick B0064
range2183982
1
7
18
annotation2183981
1
phoA BioBrick J61032
range2183981
1
19
1493
BBa_K784002
1
BBa_K784002
T7 Terminator
2012-09-12T11:00:00Z
2015-05-08T01:13:21Z
http://nar.oxfordjournals.org/content/suppl/2012/06/05/gks597.DC1/nar-00461-c-2012-File007.pdf
This part is a T7 RNAP Terminator, which can also be used for the following RNAP: T3,N4,K1F,SP6.
false
false
_1039_
0
11982
9
Not in stock
false
no particular design considerations
false
Lior Levy
BBa_K784003
1
BBa_K784003
T3 promoter
2012-09-12T11:00:00Z
2015-05-08T01:13:21Z
This part comes from the T3 Bacteriophage genome.
This part has the T3 RNA Polymerase promoter.
false
false
_1039_
0
12190
9
Not in stock
false
There are no particular consideration I had to deal with.
false
Noa Katz
BBa_K784029
1
pT3+phoA
pT3+RBS+Alkaline Phosphatase (pHO)+Terminator
2012-09-16T11:00:00Z
2015-05-08T01:13:22Z
The promoter and terminator are from:Temme Karsten, et al. 2012. Modular control of multiple pathways using engineered orthogonal T7 polymerases. Nucleic Acids Research (advance access): 1-9.
The RBS is from the parts registry,BBa_B0064 made by Endi Lab (2008)
The pHOA gene is from the parts registry,BBa_J61032 made by Arkin Lab (2006)
This part consists of T3 RNA polymerase induced promoter followed by an RBS and the ‎Alkaline Phosphatase reporter gene (pHOA) from Citrobacter.‎
The part's purpose is to monitor the translation of the T3 RNA polymerase with the Alkaline ‎Phosphatase gene which can be quantified with the PNP (para-nitrophenol phosphate) hydrolysis assay that has been ‎made by Arkin Lab group in 2006.‎
The Alkaline Phosphatase + RBS part is between XmaI and XhoI restriction sites and ‎therefore can be excised out by these enzymes.
false
false
_1039_
0
11982
9
It's complicated
false
we used XhoI and XmaI restriction sites for the ligation because these sites are not anywhere in the sequence.
false
Lior Levy
component2184059
1
BBa_K784003
component2184064
1
BBa_K784027
component2184065
1
BBa_K784002
annotation2184064
1
BBa_K784027
range2184064
1
24
1522
annotation2184065
1
BBa_K784002
range2184065
1
1523
1569
annotation2184059
1
BBa_K784003
range2184059
1
1
23
BBa_K784003_sequence
1
taataaccctcactatagggaga
BBa_K784029_sequence
1
taataaccctcactatagggagactcgagaaagaggagaaaatgttttttattttaactgtatttatacatggagaaaataaagtgaaacaaagcgctatgatttttgccttgctgcctttgctgttggctccggccagtcaggcggacaccacaacaatatccgtgctggataatcgtgcggcgcagggcgatattactacgcccggcggcgcgcgccgattaaccggcgatcaaacggcggcgctgcgtgaatcgctaaatgataaaccggcgaaaaatattattctgctgatcggcgacggaatgggagattctgaaataaccgccgcacgaaattatgccgaaggcgccggcggcttttttaaaggtattgatgccctgccgctgaccggacaatatacccactatgcgctgaataaaaaaaccggcaaaccagattacgtgaccgattccgccgcctcagccaccgcgtggtccacaggggtgaaaacctacaacggcgcgctgggggtcgatattcatgaaaaagatcatctgaccattctcgaaatggcgaaggccgcaggtctggctaccggcaacgtctcgaccgcggagttgcaggacgccaccccggcagcgctgattgcccatgtcacctcgcgcaaatgctatggcccgacggcgaccagcgaaaaatgtccgacaaacgcgctggaaaagggcggcaaaggctcgattactgaacagctcctgaacgcgcgggcggacgtcaccctgggcggcggcgcgaaaaccttcgccgagacggcaaccgccggcgagtggcaggggaaaacgctgcgtgagcaggcgcagatgcgcggctaccagttagtcggcgatgccgcctctttagcggcgatcgacgaagcgaatcaggacaaaccgctgctgggactgttcgcagaggggaatatgccggtgcgctgggaagggccgaaggcctcgtaccacggcaatattgataaacctgccgtgacctgtacgccaaatccgaaacgcaatgacgcgattcccacgctggcgcagatgaccgacaaagccatcgaactgttgagcaaaaatgagcggggcttctttttacaggtggaaggcgcgtctatcgataagcaggatcacgccgcgaacccgtgcggacagattggcgagacggtggatcttgatgaagccgtacagagggcgctggcctttgcgaagaaagacggcaatacgctggtgatcgttaccgccgatcatgctcatgccagccagatcgtggcgcccgaaacgaaagcgccggggctgacgcaggcgctgaacaccaaagatggcgcggtgatggtcatcagctacggcaactcggaagaagattcccaggagcataccggcagccagctgcgcatcgccgcttacgggccgcatgcggcgaacgtggtcgggctgaccgatcaaaccgatctgttctacaccatgaaagcggcgctgggcctgaagtaatgccgcctctgggaattcccgggtagcataaccccttggggcctctaaacgggtcttgaggggttttttg
BBa_K784027_sequence
1
ctcgagaaagaggagaaaatgttttttattttaactgtatttatacatggagaaaataaagtgaaacaaagcgctatgatttttgccttgctgcctttgctgttggctccggccagtcaggcggacaccacaacaatatccgtgctggataatcgtgcggcgcagggcgatattactacgcccggcggcgcgcgccgattaaccggcgatcaaacggcggcgctgcgtgaatcgctaaatgataaaccggcgaaaaatattattctgctgatcggcgacggaatgggagattctgaaataaccgccgcacgaaattatgccgaaggcgccggcggcttttttaaaggtattgatgccctgccgctgaccggacaatatacccactatgcgctgaataaaaaaaccggcaaaccagattacgtgaccgattccgccgcctcagccaccgcgtggtccacaggggtgaaaacctacaacggcgcgctgggggtcgatattcatgaaaaagatcatctgaccattctcgaaatggcgaaggccgcaggtctggctaccggcaacgtctcgaccgcggagttgcaggacgccaccccggcagcgctgattgcccatgtcacctcgcgcaaatgctatggcccgacggcgaccagcgaaaaatgtccgacaaacgcgctggaaaagggcggcaaaggctcgattactgaacagctcctgaacgcgcgggcggacgtcaccctgggcggcggcgcgaaaaccttcgccgagacggcaaccgccggcgagtggcaggggaaaacgctgcgtgagcaggcgcagatgcgcggctaccagttagtcggcgatgccgcctctttagcggcgatcgacgaagcgaatcaggacaaaccgctgctgggactgttcgcagaggggaatatgccggtgcgctgggaagggccgaaggcctcgtaccacggcaatattgataaacctgccgtgacctgtacgccaaatccgaaacgcaatgacgcgattcccacgctggcgcagatgaccgacaaagccatcgaactgttgagcaaaaatgagcggggcttctttttacaggtggaaggcgcgtctatcgataagcaggatcacgccgcgaacccgtgcggacagattggcgagacggtggatcttgatgaagccgtacagagggcgctggcctttgcgaagaaagacggcaatacgctggtgatcgttaccgccgatcatgctcatgccagccagatcgtggcgcccgaaacgaaagcgccggggctgacgcaggcgctgaacaccaaagatggcgcggtgatggtcatcagctacggcaactcggaagaagattcccaggagcataccggcagccagctgcgcatcgccgcttacgggccgcatgcggcgaacgtggtcgggctgaccgatcaaaccgatctgttctacaccatgaaagcggcgctgggcctgaagtaatgccgcctctgggaattcccggg
BBa_K784002_sequence
1
tagcataaccccttggggcctctaaacgggtcttgaggggttttttg
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z