BBa_J23107
1
BBa_J23107
constitutive promoter family member
2006-08-16T11:00:00Z
2015-08-31T04:08:40Z
Later
Later
false
false
_52_
0
483
95
It's complicated
true
N/A
true
John Anderson
BBa_K861020
1
BBa_K861020
FadE ,acyl-CoA dehydrogenase
2012-09-05T11:00:00Z
2015-05-08T01:13:35Z
E.coli str.K12 DH5α
The first step in the beta-oxidation pathway involves the conversion of acyl-CoA to enoyl-CoA through acyl-CoA dehydrogenase (FadE). Its action results in the introduction of a trans double-bond between C2 and C3 of the acyl-CoA thioester substrate. And it is repressed by FadR.
false
false
_1121_
0
12357
9
It's complicated
false
None
false
Kuanwei Sheng
BBa_K861026
1
BBa_K861026
Constitutively expressed FadE
2012-09-20T11:00:00Z
2015-05-08T01:13:35Z
E.coli K12 DH5α
The first step in the beta-oxidation pathway involves the conversion of acyl-CoA to enoyl-CoA. This process is catalyzed by acyl-CoA dehydrogenase FadE(BBa_K861020). Its action results in the introduction of a trans double-bond between C2 and C3 of the acyl-CoA thioester substrate. This part was designed to characterize the effect of the gene FadE on fatty acid consumption.
false
false
_1121_
0
11007
9
It's complicated
false
None
false
Kuanwei Sheng
component2190487
1
BBa_K861022
component2190481
1
BBa_J23107
annotation2190481
1
BBa_J23107
range2190481
1
1
35
annotation2190487
1
BBa_K861022
range2190487
1
44
2612
BBa_B0024
1
BBa_B0024
double terminator (B0012-B0011), reversed
2003-12-02T12:00:00Z
2015-08-31T04:07:20Z
-- No description --
false
false
_1_
0
24
7
In stock
false
true
Caitlin Conboy
BBa_B0030
1
BBa_B0030
RBS.1 (strong) -- modified from R. Weiss
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
Strong RBS based on Ron Weiss thesis. Strength is considered relative to <bb_part>BBa_B0031</bb_part>, <bb_part>BBa_B0032</bb_part>, <bb_part>BBa_B0033</bb_part>.
false
true
_44_46_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix ("orig" in figure 4-14 of Ron Weiss thesis). <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS.
Contact info <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation1702
1
RBS
range1702
1
8
12
annotation1701
1
RBS-1\Strong
range1701
1
1
15
annotation7025
1
BBa_B0030
range7025
1
1
15
BBa_K861022
1
BBa_K861022
FadE with RBS and terminator
2012-09-05T11:00:00Z
2015-05-08T01:13:35Z
E.coli str.K12 lab mutant DH5α
FadE was from e.coli DH5α, catalyze the conversion of acyl-CoA to enoyl-CoA.
false
false
_1121_
0
12357
9
It's complicated
false
None
false
Kuanwei Sheng
component2181851
1
BBa_K861020
component2181852
1
BBa_B0024
component2181849
1
BBa_B0030
annotation2181851
1
BBa_K861020
range2181851
1
22
2466
annotation2181849
1
BBa_B0030
range2181849
1
1
15
annotation2181852
1
BBa_B0024
range2181852
1
2475
2569
BBa_B0024_sequence
1
aaataataaaaaagccggattaataatctggctttttatattctctctctagtatataaacgcagaaaggcccacccgaaggtgagccagtgtga
BBa_J23107_sequence
1
tttacggctagctcagccctaggtattatgctagc
BBa_K861020_sequence
1
atgatgattttgagtattctcgctacggttgtcctgctcggcgcgttgttctatcaccgcgtgagcttatttatcagcagtctgattttgctcgcctggacagcctccctcggcgttgctggtctgtggtcggcgtgggtactggtgcctctggccattatcctcgtgccatttaactttgcgcctatgcgtaagtcgatgatttccgcgccggtatttcgcggtttccgtaaggtgatgccgccgatgtcgcgcactgagaaagaagcgattgatgcgggcaccacctggtgggagggcgacttgttccagggcaagccggactggaaaaagctgcataactatccgcagccgcgcctgaccgccgaagagcaagcgtttctcgacggcccggtagaagaagcctgccggatggcgaatgatttccagatcacccatgagctggcggatctgccgccggagttgtgggcgtaccttaaagagcatcgtttcttcgcgatgatcatcaaaaaagagtacggcgggctggagttctcggcttatgcccagtctcgcgtgctgcaaaaactctccggcgtgagcgggatcctggcgattaccgtcggcgtgccaaactcattaggcccgggcgaactgttgcaacattacggcactgacgagcagaaagatcactatctgccgcgtctggcgcgtggtcaggagatcccctgctttgcactgaccagcccggaagcgggttccgatgcgggcgcgattccggacaccgggattgtctgcatgggcgaatggcagggccagcaggtgctggggatgcgtctgacctggaacaaacgctacattacgctggcaccgattgcgactgtgcttgggctggcgtttaaactctccgacccggaaaagctgctgggtggcgcagaagatttaggtattacctgtgcgctgatcccgaccaccacgccgggcgtggaaattggtcgtcgccacttcccgctgaacgtaccgttccagaacggaccgacgcgcggtaaagatgtcttcgtaccgatcgattacatcatcggtgggccgaaaatggccgggcaaggctggcggatgctggtggagtgcctctcggtaggccgcggcatcaccctgccttccaactcaaccggcggcgtgaaatcggtagcgctggcaacgggcgcgtatgctcacattcgccgtcagttcaaaatctctatcggtaagatggaagggattgaagagccgctggcgcgtattgccggtaatgcctacgtgatggatgctgcggcatcgctgattacctacggcattatgctcggcgaaaaacctgccgtgctgtcggctatcgttaagtatcactgtacccaccgcgggcagcagtcgattattgatgcgatggatatcactggtggcaaaggcattatgctcgggcagagcaacttcctggcgcgtgcttaccagggcgcaccgattgccatcaccgttgaaggggccaacattctgacccgcagcatgatgatcttcggacaaggagcgattcgttgccatccgtacgtgctggaagagatggaagcagcgaagaacaatgacgtcaacgcgttcgataaactgttgttcaaacatatcggtcacgtcggtagcaacaaagttcgcagcttctggctgggcctgacgcgcggtttaaccagcagcacgccaaccggcgatgccactaaacgctactatcagcacctgaaccgcctgagcgccaacctcgccctgctttctgatgtctcgatggctgtgctgggcggcagcctgaaacgtcgtgagcgcatctcggcacgtctgggggatattttaagccagctttacctcgcctctgccgttctgaagcgttatgacgacgaaggccgtaatgaagccgacctgccgctggtgcactggggcgtacaagatgcgctgtatcaggctgaacaggcgatggatgatttactgcaaaacttcccgaaccgcgtggttgccgggctgctgaatgtggtgatcttcccgaccggacgtcattatctggcaccttctgacaagctggatcataaagtggcgaagattttacaagtgccgaacgccacccgttcccgcattggtcgcggtcagtacctgacgccgagcgagcataatccggttggcttgctggaagaggcgctggtggatgtgattgccgccgacccaattcatcagcggatctgtaaagagctgggtaaaaacctgccgtttacccgtctggatgaactggcgcacaacgcgctggcgaaggggctgattgataaagatgaagccgctattctggtgaaagctgaagaaagccgtctgcgcagtattaacgttgatgactttgatccggaagagctggcgacgaagccggtaaagttgccggagaaagtgcggaaagttgaagccgcgtaa
BBa_K861026_sequence
1
tttacggctagctcagccctaggtattatgctagctactagagattaaagaggagaaatactagatgatgattttgagtattctcgctacggttgtcctgctcggcgcgttgttctatcaccgcgtgagcttatttatcagcagtctgattttgctcgcctggacagcctccctcggcgttgctggtctgtggtcggcgtgggtactggtgcctctggccattatcctcgtgccatttaactttgcgcctatgcgtaagtcgatgatttccgcgccggtatttcgcggtttccgtaaggtgatgccgccgatgtcgcgcactgagaaagaagcgattgatgcgggcaccacctggtgggagggcgacttgttccagggcaagccggactggaaaaagctgcataactatccgcagccgcgcctgaccgccgaagagcaagcgtttctcgacggcccggtagaagaagcctgccggatggcgaatgatttccagatcacccatgagctggcggatctgccgccggagttgtgggcgtaccttaaagagcatcgtttcttcgcgatgatcatcaaaaaagagtacggcgggctggagttctcggcttatgcccagtctcgcgtgctgcaaaaactctccggcgtgagcgggatcctggcgattaccgtcggcgtgccaaactcattaggcccgggcgaactgttgcaacattacggcactgacgagcagaaagatcactatctgccgcgtctggcgcgtggtcaggagatcccctgctttgcactgaccagcccggaagcgggttccgatgcgggcgcgattccggacaccgggattgtctgcatgggcgaatggcagggccagcaggtgctggggatgcgtctgacctggaacaaacgctacattacgctggcaccgattgcgactgtgcttgggctggcgtttaaactctccgacccggaaaagctgctgggtggcgcagaagatttaggtattacctgtgcgctgatcccgaccaccacgccgggcgtggaaattggtcgtcgccacttcccgctgaacgtaccgttccagaacggaccgacgcgcggtaaagatgtcttcgtaccgatcgattacatcatcggtgggccgaaaatggccgggcaaggctggcggatgctggtggagtgcctctcggtaggccgcggcatcaccctgccttccaactcaaccggcggcgtgaaatcggtagcgctggcaacgggcgcgtatgctcacattcgccgtcagttcaaaatctctatcggtaagatggaagggattgaagagccgctggcgcgtattgccggtaatgcctacgtgatggatgctgcggcatcgctgattacctacggcattatgctcggcgaaaaacctgccgtgctgtcggctatcgttaagtatcactgtacccaccgcgggcagcagtcgattattgatgcgatggatatcactggtggcaaaggcattatgctcgggcagagcaacttcctggcgcgtgcttaccagggcgcaccgattgccatcaccgttgaaggggccaacattctgacccgcagcatgatgatcttcggacaaggagcgattcgttgccatccgtacgtgctggaagagatggaagcagcgaagaacaatgacgtcaacgcgttcgataaactgttgttcaaacatatcggtcacgtcggtagcaacaaagttcgcagcttctggctgggcctgacgcgcggtttaaccagcagcacgccaaccggcgatgccactaaacgctactatcagcacctgaaccgcctgagcgccaacctcgccctgctttctgatgtctcgatggctgtgctgggcggcagcctgaaacgtcgtgagcgcatctcggcacgtctgggggatattttaagccagctttacctcgcctctgccgttctgaagcgttatgacgacgaaggccgtaatgaagccgacctgccgctggtgcactggggcgtacaagatgcgctgtatcaggctgaacaggcgatggatgatttactgcaaaacttcccgaaccgcgtggttgccgggctgctgaatgtggtgatcttcccgaccggacgtcattatctggcaccttctgacaagctggatcataaagtggcgaagattttacaagtgccgaacgccacccgttcccgcattggtcgcggtcagtacctgacgccgagcgagcataatccggttggcttgctggaagaggcgctggtggatgtgattgccgccgacccaattcatcagcggatctgtaaagagctgggtaaaaacctgccgtttacccgtctggatgaactggcgcacaacgcgctggcgaaggggctgattgataaagatgaagccgctattctggtgaaagctgaagaaagccgtctgcgcagtattaacgttgatgactttgatccggaagagctggcgacgaagccggtaaagttgccggagaaagtgcggaaagttgaagccgcgtaatactagagaaataataaaaaagccggattaataatctggctttttatattctctctctagtatataaacgcagaaaggcccacccgaaggtgagccagtgtga
BBa_K861022_sequence
1
attaaagaggagaaatactagatgatgattttgagtattctcgctacggttgtcctgctcggcgcgttgttctatcaccgcgtgagcttatttatcagcagtctgattttgctcgcctggacagcctccctcggcgttgctggtctgtggtcggcgtgggtactggtgcctctggccattatcctcgtgccatttaactttgcgcctatgcgtaagtcgatgatttccgcgccggtatttcgcggtttccgtaaggtgatgccgccgatgtcgcgcactgagaaagaagcgattgatgcgggcaccacctggtgggagggcgacttgttccagggcaagccggactggaaaaagctgcataactatccgcagccgcgcctgaccgccgaagagcaagcgtttctcgacggcccggtagaagaagcctgccggatggcgaatgatttccagatcacccatgagctggcggatctgccgccggagttgtgggcgtaccttaaagagcatcgtttcttcgcgatgatcatcaaaaaagagtacggcgggctggagttctcggcttatgcccagtctcgcgtgctgcaaaaactctccggcgtgagcgggatcctggcgattaccgtcggcgtgccaaactcattaggcccgggcgaactgttgcaacattacggcactgacgagcagaaagatcactatctgccgcgtctggcgcgtggtcaggagatcccctgctttgcactgaccagcccggaagcgggttccgatgcgggcgcgattccggacaccgggattgtctgcatgggcgaatggcagggccagcaggtgctggggatgcgtctgacctggaacaaacgctacattacgctggcaccgattgcgactgtgcttgggctggcgtttaaactctccgacccggaaaagctgctgggtggcgcagaagatttaggtattacctgtgcgctgatcccgaccaccacgccgggcgtggaaattggtcgtcgccacttcccgctgaacgtaccgttccagaacggaccgacgcgcggtaaagatgtcttcgtaccgatcgattacatcatcggtgggccgaaaatggccgggcaaggctggcggatgctggtggagtgcctctcggtaggccgcggcatcaccctgccttccaactcaaccggcggcgtgaaatcggtagcgctggcaacgggcgcgtatgctcacattcgccgtcagttcaaaatctctatcggtaagatggaagggattgaagagccgctggcgcgtattgccggtaatgcctacgtgatggatgctgcggcatcgctgattacctacggcattatgctcggcgaaaaacctgccgtgctgtcggctatcgttaagtatcactgtacccaccgcgggcagcagtcgattattgatgcgatggatatcactggtggcaaaggcattatgctcgggcagagcaacttcctggcgcgtgcttaccagggcgcaccgattgccatcaccgttgaaggggccaacattctgacccgcagcatgatgatcttcggacaaggagcgattcgttgccatccgtacgtgctggaagagatggaagcagcgaagaacaatgacgtcaacgcgttcgataaactgttgttcaaacatatcggtcacgtcggtagcaacaaagttcgcagcttctggctgggcctgacgcgcggtttaaccagcagcacgccaaccggcgatgccactaaacgctactatcagcacctgaaccgcctgagcgccaacctcgccctgctttctgatgtctcgatggctgtgctgggcggcagcctgaaacgtcgtgagcgcatctcggcacgtctgggggatattttaagccagctttacctcgcctctgccgttctgaagcgttatgacgacgaaggccgtaatgaagccgacctgccgctggtgcactggggcgtacaagatgcgctgtatcaggctgaacaggcgatggatgatttactgcaaaacttcccgaaccgcgtggttgccgggctgctgaatgtggtgatcttcccgaccggacgtcattatctggcaccttctgacaagctggatcataaagtggcgaagattttacaagtgccgaacgccacccgttcccgcattggtcgcggtcagtacctgacgccgagcgagcataatccggttggcttgctggaagaggcgctggtggatgtgattgccgccgacccaattcatcagcggatctgtaaagagctgggtaaaaacctgccgtttacccgtctggatgaactggcgcacaacgcgctggcgaaggggctgattgataaagatgaagccgctattctggtgaaagctgaagaaagccgtctgcgcagtattaacgttgatgactttgatccggaagagctggcgacgaagccggtaaagttgccggagaaagtgcggaaagttgaagccgcgtaatactagagaaataataaaaaagccggattaataatctggctttttatattctctctctagtatataaacgcagaaaggcccacccgaaggtgagccagtgtga
BBa_B0030_sequence
1
attaaagaggagaaa
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z