BBa_K216005
1
BBa_K216005
PyeaR promoter, responsive to nitrate, nitrite and nitric oxide
2009-09-24T11:00:00Z
2015-05-08T01:11:30Z
BioBricked from E. coli K-12 genomic DNA by the Edinburgh 2009 iGEM team.
PyeaR promoter. This is the promoter of the Escherichia coli yeaR/yoaG operon (see Lin, H.-Y., Bledsoe, P.J., and Stewart, V. 2007. Activation of yeaR-yoaG operon transcription by the nitrate-responsive regulator NarL is independent of oxygen-responsive regulator Fnr in ''Escherichia coli'' K-12. J. Bacteriol. 189, 7539-7548). Unlike other E. coli promoters responding to nitrate and nitrite, this promoter is not repressed under aerobic conditions.
false
false
_317_
0
837
163
It's complicated
true
No special considerations.
false
Edinburgh iGEM 2009
annotation2027072
1
NarL-binding region
range2027072
1
50
65
annotation2027074
1
promoter -35 region
range2027074
1
66
71
annotation2027073
1
NsrR-binding region
range2027073
1
58
80
annotation2027075
1
promoter -10 region
range2027075
1
89
94
BBa_K876059
1
BBa_K876059
pyear-luxS
2012-10-01T11:00:00Z
2015-05-08T01:13:39Z
N/A
pyear is a promoter induced by Nitrate. LuxS converts SAM into the autoinducer Ai-2.
true
false
_1138_
0
13835
9
Discontinued
false
N/A
false
Leah Ferrell, Sanket Shah, Shayan Ghassemi, Zakaraya Ashour
component2206355
1
BBa_K216005
component2206356
1
BBa_K091109
annotation2206355
1
BBa_K216005
range2206355
1
1
100
annotation2206356
1
BBa_K091109
range2206356
1
107
622
BBa_K091109
1
BBa_K091109
LuxS
2008-06-18T11:00:00Z
2015-05-08T01:08:37Z
The LuxS sequence was pulled from E. coli MG1655 by predesigned primers.
LuxS is a synthase for the AI-2 quorum sensing system. This protein is involved in the production of small molecules that are readily absorbed by multiple species of bacteria. LuxS can be used as part of a positive feedback loop in cell to cell signaling.
false
false
_191_
0
3129
9
It's complicated
false
Nucleotide position 54 changed from A to T in order to destroy a PstI site; this is a sense mutation
Also changed stop codon from TAG to TAA (recommended in Registry Help)
false
Andrew Gordon
BBa_K091109_sequence
1
atgccgttgttagatagcttcacagtcgatcatacccggatggaagcgcctgctgttcgggtggcgaaaacaatgaacaccccgcatggcgacgcaatcaccgtgttcgatctgcgcttctgcgtgccgaacaaagaagtgatgccagaaagagggatccataccctggagcacctgtttgctggttttatgcgtaaccatcttaacggtaatggtgtagagattatcgatatctcgccaatgggctgccgcaccggtttttatatgagtctgattggtacgccagatgagcagcgtgttgctgatgcctggaaagcggcaatggaagacgtgctgaaagtgcaggatcagaatcagatcccggaactgaacgtctaccagtgtggcacttaccagatgcactcgttgcaggaagcgcaggatattgcgcgtagcattctggaacgtgacgtacgcatcaacagcaacgaagaactggcactgccgaaagagaagttgcaggaactgcacatctaa
BBa_K216005_sequence
1
ttcccatctataatcctccctgattcttcgctgatatggtgctaaaaagtaaccaataaatggtatttaaaatgcaaattatcaggcgtaccctgaaacg
BBa_K876059_sequence
1
ttcccatctataatcctccctgattcttcgctgatatggtgctaaaaagtaaccaataaatggtatttaaaatgcaaattatcaggcgtaccctgaaacgtactagatgccgttgttagatagcttcacagtcgatcatacccggatggaagcgcctgctgttcgggtggcgaaaacaatgaacaccccgcatggcgacgcaatcaccgtgttcgatctgcgcttctgcgtgccgaacaaagaagtgatgccagaaagagggatccataccctggagcacctgtttgctggttttatgcgtaaccatcttaacggtaatggtgtagagattatcgatatctcgccaatgggctgccgcaccggtttttatatgagtctgattggtacgccagatgagcagcgtgttgctgatgcctggaaagcggcaatggaagacgtgctgaaagtgcaggatcagaatcagatcccggaactgaacgtctaccagtgtggcacttaccagatgcactcgttgcaggaagcgcaggatattgcgcgtagcattctggaacgtgacgtacgcatcaacagcaacgaagaactggcactgccgaaagagaagttgcaggaactgcacatctaa
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z