BBa_M11084
1
ompC w/Cad
E coli outer membrane protein C (ompC) with Cadmium Binding protien
2009-04-17T11:00:00Z
2015-05-08T01:13:53Z
The source of the ompC gene is:
Escherichia coli SMS-3-5
DNA Coordinates 2395366..2396460 (-)(1095bp)
OmpC is normally found in the outer membrane of E. coli. Coding for a Cadmium binding protein was inserted on the 9th hydrophylic loop which protrudes out of the cell.
The sequence
This biobrick would be useful for the binding cadmium to the cell wall of E. coli. It could be applicable to water treatment applications.
false
false
_302_
0
4574
302
Not in stock
true
The 9th hydrophylic loop protrudes out of the cell and normally contains a PstI RE site just after the loop exits the outer membrane lipid layer.
The PstI site 886bp in to the ompC sequence and it is in the 9th loop.
To make this biobrick the the PstI site at 638bp and the EcoRI site at 388bp of the gene was inactivated by mutation during synthesis.
false
Jason D. Brown
annotation2002571
1
start
range2002571
1
1
3
annotation2002576
1
stop
range2002576
1
1711
1713
annotation2002572
1
1st half ompC
range2002572
1
4
888
annotation2002574
1
2nd half ompC
range2002574
1
1509
1707
annotation2002573
1
Cadmium Binding Protein
range2002573
1
889
1508
annotation2002575
1
stop
range2002575
1
1708
1710
BBa_M11084_sequence
1
atgaaagttaaagtactgtccctcctggtcccagctctgctggtagcaggcgcagcaaacgctgctgaaatttacaacaaagacggcaacaaattagatctgtacggtaaagttgacggcctgcactatttctccgataacgactctaaagatggcgacaagacctacatgcgtcttggcttcaaaggtgaaactcaggttactgatcaactgaccggttatggtcagtgggaatatcagattcaaggtaacgaacctgaaagtgacaatagttcctggacccgtgtggcattcgctggtctgaaattccaggacgttggttcttttgactatggtcgtaactacggcgttgtttacgatgttacttcctggaccgacgtactgccagacttcggtggtgatacctacgattctgataacttcatgcagcagcgtggtaacggtttcgcgacctaccgtaacaccgacttcttcggtctggttgacggtcttgattttgctgttcagtatcagggtaaaaacggtagtgctcatggcgaaggtatgaccactaatggccgtgatgatgtatttgagcagaacggtgacggtgttggtggttctattacttacaattatgaaggctttggtatcggtgctacagtttccagctccaaacgtacctgggatcagaacaacactggcctgatcggtactggcgaccgtgctgaaacctacactggtggtctgaaatacgacgctaacaacatctacctggctgctcagtacacccagacctacaacgcaactcgcgtaggttccctgggttgggcgaacaaagcacagaacttcgaagctgttgctcagtaccagttcgacttcggtctgcgtccgtccctggcttacctgatgattcaaacggttgttgctgctgctgttctttatattgctacagcagttgatttattagtaattttattaatattttttgctagagcaaagactagaaaagaatatagagatatttatgttggtcaatatttagggtctattattttaatattagttagtttgtttttagcttttgtattaaattatgttccagaaaagtggatattaggtttattgggtttaataccaatttatcttggaattaaagtggctatttatgatgattgtgaaggagaaaagagagctaaaaaagaattgaatgaaaaaggattgtctaaattagttggtacggttgcaattgttacgatagcaagttgtggcgccgataatattggtttatttgttccgtattttgtgacattaagtgttactaatttattacttactctgtttgtctttttaattttaattttcttcttggtgtttactgcacaaaaattagctaatattccaggaattggagaaattgttgagaaatttagtcgttggattatggctattatttatatagctttaggtttatttattattattgaaaatgacactattcaaacaattttaggatttatatttcagtctaaaggtaaaaacctgggtcgtggctacgacgacgaagatatcctgaaatatgttgatgttggtgcgacctactacttcaacaaaaacatgtccacctacgttgactacaaaatcaacctgctggacgacaaccagttcacccgcgctgctggcatcaacactgatgacatcgtagctctgggtctggtttaccagttctaatag
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z