BBa_J31000
1
Hin
DNA-invertase Hin from Salmonella typhimurium
2006-06-04T11:00:00Z
2015-08-31T04:08:45Z
Salmonella typhimurium
Generates the Salmonella typhimurium Hin protein. This protein is used to invert DNA that is flanked by Hix siteds.
false
false
_61_
0
918
61
It's complicated
false
none really
false
Erin Zwack, Sabriya Rosemond
annotation1884987
1
Hin sequence
range1884987
1
1
573
annotation1880460
1
Mutation to delete the SpeI site
range1880460
1
72
72
annotation1910568
1
Fwd primer J31001
range1910568
1
1
3
annotation1880459
1
Former SpeI site
range1880459
1
70
75
annotation1910569
1
Rev primer J31001
range1910569
1
551
570
BBa_B0030
1
BBa_B0030
RBS.1 (strong) -- modified from R. Weiss
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
Strong RBS based on Ron Weiss thesis. Strength is considered relative to <bb_part>BBa_B0031</bb_part>, <bb_part>BBa_B0032</bb_part>, <bb_part>BBa_B0033</bb_part>.
false
true
_44_46_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix ("orig" in figure 4-14 of Ron Weiss thesis). <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS.
Contact info <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation1702
1
RBS
range1702
1
8
12
annotation7025
1
BBa_B0030
range7025
1
1
15
annotation1701
1
RBS-1\Strong
range1701
1
1
15
BBa_M12070
1
BBa_M12070
hin invertase under constitutive promoter pspv from Salmonella
2010-05-11T11:00:00Z
2015-05-08T01:13:55Z
This device comes from multiple BioBrick parts.
This part codes for the protein hin, which acts a flippase. The promoter under this device is constitutive.
false
false
_548_
0
6718
9
Not in stock
false
We needed the flippase to act with a constitutive promoter in order to serve the function for the coin flipper device in our system.
false
Logan Trimble
component2069188
1
BBa_B0030
component2069179
1
BBa_B0010
component2069186
1
BBa_J31000
component2069178
1
BBa_K112707
annotation2069179
1
BBa_B0010
range2069179
1
1965
2044
annotation2069188
1
BBa_B0030
range2069188
1
2632
2646
annotation2069178
1
BBa_K112707
range2069178
1
1
1956
annotation2069186
1
BBa_J31000
range2069186
1
2051
2623
BBa_B0010
1
BBa_B0010
T1 from E. coli rrnB
2003-11-19T12:00:00Z
2015-08-31T04:07:20Z
Transcriptional terminator consisting of a 64 bp stem-loop.
false
false
_1_
0
24
7
In stock
false
true
Randy Rettberg
annotation4184
1
stem_loop
range4184
1
12
55
annotation7018
1
BBa_B0010
range7018
1
1
80
BBa_K112707
1
BBa_K112707
Pspv from <I>Salmonella</I>
2008-10-20T11:00:00Z
2015-05-08T01:09:18Z
<pre>
Construction of <Pspv> basic part K112707
PCR of dv017/dv016 on pBca1037 (499bp, EcoRI/BamHI/DpnI)
Sub into pBca1256 (EcoRI/BamHI, 2472+499, L)
Product is pBca1256-K112707
-----------------------------------------------
dv017 Forward biobricking of <Pspv>
cgataGAATTCatgAGATCTaGATCCTGTGATGTTTGGCG
dv016 Reverse biobricking of <Pspv>
cgttaGGATCCGATAATGTtTGCAGGGGAATTATTTTG
</pre>
The spv promoter.
----
This part is in BBb Format. It is flanked by BamHI and BglII sites instead of XbaI and SpeI. More information about the BBb Format is available at:<br>
[http://openwetware.org/wiki/Template:AndersonLab:BBb_Standard BBb Standard Description Page]
false
false
_224_
0
2998
9
Not in stock
false
false
Bing Xia
BBa_B0010_sequence
1
ccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctc
BBa_B0030_sequence
1
attaaagaggagaaa
BBa_J31000_sequence
1
atggctactattgggtatattcgggtgtcaacaattgaccaaaatatcgatttacagcgtaatgcgcttaccagtgcaaattgtgaccgcatttttgaagaccgtatcagtggcaagattgcaaaccgccccggcctgaaacgggcgttaaagtatgtaaataaaggcgatactcttgtcgtctggaaattagacagactgggccgtagcgtgaaaaatctggtggcgttaatatcagaattacatgaacgtggagctcacttccattctttaaccgatagtattgataccagtagcgcgatggggcgattcttttttcatgtaatgtcagcactggccgagatggagcgagaattaatcgtcgagcgaacccttgccggactggctgccgccagagcgcaaggacgactgggagggcgccctcgggcgatcaacaaacatgaacaggaacagattagtcggctattagagaaaggccatcctcggcagcaattagctattatttttggtattggcgtatccaccttatacagatactttccggcaagcagtataaaaaaacgaatgaattaa
BBa_M12070_sequence
1
agatcctgtgatgtttggcgattgatcagatcgcacaatccgggctgagttccctttcagtgatctactattttgcgaagctatttagtgcacactaatcgatttttcagacaacctttctcgcctggcgtgagttttcgttcgactgaacctataaaaaggctctgcattctgtcctgtagtgcgccaggcctaataacgcctcccgtttaattccggcccggtcgtacatcggttctgttcatttatgggatcgcgactttttcgttgtaatgcttcaagagcgattttttgttctgcggtcaactcaacattcatagccatcagcatgatcctgattatttttgaaaccaagcatcttcattgatcatgggtatacatcgttgttatccagctatacatcataacaggtcaattaaatccactcagaaataaagtcagggtatgcataaaatctatcgcccataatcctatccagtaaccccatgattagtaagaactaatcagtctgtgcaaaaacaggtcaccgccatcctgtttttgcacatcaaaacattttttcaggattattctgaaaaaaaaaaggagatattatggatttcttgattaataaaaaattaaaaattttcataacactgatggaaacaggttccttcagtatcgcaacatcagtactgtatatcacccgaaccccgctgagcagggttatttcagacctggaaagagagctgaaacaaagactctttatacggaagaatggcactcttatcccaaccgaatttgcacaaactatttatcgaaaagtaaaatcccattatattttcttacatgcactggagcaggaaatcggacctacgggtaaaacgaaacaactagaaataatatttgacgaaatttatccgggaagtttaaaaaatctgatcatttcagcactgaccatttccggccaaaaaacaaatataatggggagagccgttaacagccaaataatagaagaactgtgtcagacaaacaactgcattgttatttctgccagaaattattttcatcgggaatcgcttgtctgccggacatcagtggagggtggggtcatgttatttattcctaaaaaattctttctctgcggcaaacctgatatcaacaggctggccggaacacctgtactttttcatgagggggctaaaaattttaatctggacaccatataccatttttttgaacagacactaggtattaccaaccctgcattcagttttgataacgtcgatttgttcagttcactgtaccggttacaacaagggctggcgatgttactcatccccgtcagagtctgtcgggctctgggattatcaacagatcacgcactgcacatcaaaggcgtagcgctctgtacctccttgtattacccgaccaagaaacgggagacaccagattatcgtaaagctataaaactgatacagcaggaactgaaacagtccaccttctgaccttatgcagcgtaagggccgcaacacctgtattcacggcatttgccagattcagattgtcagcaatccccatcctccatagcggtagttcaccgcggagcatggagtaaaccggctggtcgccgtcaatctgacacagaatcagtttgatgctctggtggattacctaaaacatgggcattaacgcgctggctcacgccactttactgaagaaactgaataacggtgactatgacggcgcagcgaatgaattaattcctgaaatgggaccacgccagcggtcaggttgttcccggcctgacccgacgccggagcgctgaacgttgcttattcctgagttaatttgttgtgccatctttgcacaccgggaaccgcgattccgcacagcagaaaaatagcacataaataaactcaatataagccactcattttctggcaatacaaaataattcccctgcaaacattatcgtactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagatggctactattgggtatattcgggtgtcaacaattgaccaaaatatcgatttacagcgtaatgcgcttaccagtgcaaattgtgaccgcatttttgaagaccgtatcagtggcaagattgcaaaccgccccggcctgaaacgggcgttaaagtatgtaaataaaggcgatactcttgtcgtctggaaattagacagactgggccgtagcgtgaaaaatctggtggcgttaatatcagaattacatgaacgtggagctcacttccattctttaaccgatagtattgataccagtagcgcgatggggcgattcttttttcatgtaatgtcagcactggccgagatggagcgagaattaatcgtcgagcgaacccttgccggactggctgccgccagagcgcaaggacgactgggagggcgccctcgggcgatcaacaaacatgaacaggaacagattagtcggctattagagaaaggccatcctcggcagcaattagctattatttttggtattggcgtatccaccttatacagatactttccggcaagcagtataaaaaaacgaatgaattaatactagagattaaagaggagaaa
BBa_K112707_sequence
1
agatcctgtgatgtttggcgattgatcagatcgcacaatccgggctgagttccctttcagtgatctactattttgcgaagctatttagtgcacactaatcgatttttcagacaacctttctcgcctggcgtgagttttcgttcgactgaacctataaaaaggctctgcattctgtcctgtagtgcgccaggcctaataacgcctcccgtttaattccggcccggtcgtacatcggttctgttcatttatgggatcgcgactttttcgttgtaatgcttcaagagcgattttttgttctgcggtcaactcaacattcatagccatcagcatgatcctgattatttttgaaaccaagcatcttcattgatcatgggtatacatcgttgttatccagctatacatcataacaggtcaattaaatccactcagaaataaagtcagggtatgcataaaatctatcgcccataatcctatccagtaaccccatgattagtaagaactaatcagtctgtgcaaaaacaggtcaccgccatcctgtttttgcacatcaaaacattttttcaggattattctgaaaaaaaaaaggagatattatggatttcttgattaataaaaaattaaaaattttcataacactgatggaaacaggttccttcagtatcgcaacatcagtactgtatatcacccgaaccccgctgagcagggttatttcagacctggaaagagagctgaaacaaagactctttatacggaagaatggcactcttatcccaaccgaatttgcacaaactatttatcgaaaagtaaaatcccattatattttcttacatgcactggagcaggaaatcggacctacgggtaaaacgaaacaactagaaataatatttgacgaaatttatccgggaagtttaaaaaatctgatcatttcagcactgaccatttccggccaaaaaacaaatataatggggagagccgttaacagccaaataatagaagaactgtgtcagacaaacaactgcattgttatttctgccagaaattattttcatcgggaatcgcttgtctgccggacatcagtggagggtggggtcatgttatttattcctaaaaaattctttctctgcggcaaacctgatatcaacaggctggccggaacacctgtactttttcatgagggggctaaaaattttaatctggacaccatataccatttttttgaacagacactaggtattaccaaccctgcattcagttttgataacgtcgatttgttcagttcactgtaccggttacaacaagggctggcgatgttactcatccccgtcagagtctgtcgggctctgggattatcaacagatcacgcactgcacatcaaaggcgtagcgctctgtacctccttgtattacccgaccaagaaacgggagacaccagattatcgtaaagctataaaactgatacagcaggaactgaaacagtccaccttctgaccttatgcagcgtaagggccgcaacacctgtattcacggcatttgccagattcagattgtcagcaatccccatcctccatagcggtagttcaccgcggagcatggagtaaaccggctggtcgccgtcaatctgacacagaatcagtttgatgctctggtggattacctaaaacatgggcattaacgcgctggctcacgccactttactgaagaaactgaataacggtgactatgacggcgcagcgaatgaattaattcctgaaatgggaccacgccagcggtcaggttgttcccggcctgacccgacgccggagcgctgaacgttgcttattcctgagttaatttgttgtgccatctttgcacaccgggaaccgcgattccgcacagcagaaaaatagcacataaataaactcaatataagccactcattttctggcaatacaaaataattcccctgcaaacattatcg
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z