BBa_B0034
1
BBa_B0034
RBS (Elowitz 1999) -- defines RBS efficiency
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
RBS based on Elowitz repressilator.
false
true
_1_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS.
Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation23325
1
conserved
range23325
1
5
8
BBa_B0015
1
BBa_B0015
double terminator (B0010-B0012)
2003-07-16T11:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
Double terminator consisting of BBa_B0010 and BBa_B0012
false
true
_1_
0
24
7
In stock
false
true
Reshma Shetty
component1916610
1
BBa_B0010
component1916612
1
BBa_B0012
annotation1916612
1
BBa_B0012
range1916612
1
89
129
annotation1916610
1
BBa_B0010
range1916610
1
1
80
BBa_B0012
1
BBa_B0012
TE from coliphageT7
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Derived from the TE terminator of T7 bacteriophage between Genes 1.3 and 1.4 <genbank>V01146</genbank>.
Released HQ 2013
Transcription terminator for the <i>E.coli</i> RNA polymerase.
false
false
_1_
0
24
7
In stock
false
<P> <P>Suggested by Sri Kosuri and Drew Endy as a high efficiency terminator. The 5' end cutoff was placed immediately after the TAA stop codon and the 3' end cutoff was placed just prior to the RBS of Gene 1.4 (before AAGGAG).<P> Use anywhere transcription should be stopped when the gene of interest is upstream of this terminator.
false
Reshma Shetty
annotation1686
1
T7 TE
range1686
1
8
27
annotation7020
1
BBa_B0012
range7020
1
1
41
annotation1687
1
stop
range1687
1
34
34
annotation1690
1
polya
range1690
1
28
41
BBa_J23119
1
BBa_J23119
constitutive promoter family member
2006-08-23T11:00:00Z
2015-08-31T04:08:40Z
Overlap extension of synthetic oligonucleotides
Released HQ 2013
Later
false
true
_52_
0
483
95
In stock
false
N/A
true
John Anderson
BBa_M1635
1
BBa_M1635
Pyrearinus termitilluminans prothoracic luciferase
2013-04-23T11:00:00Z
2015-05-08T01:13:57Z
AF116843
pH insensitive luciferase
E.coli optimized
cut sites taken out for standardized part
can be used to report similar to GFP, but it glows and doesn't fluoresce
false
false
_768_
0
16143
9
Not in stock
false
pH insensitive luciferase
E.coli optimized
cut sites taken out for standardized part
false
Chauncey Tucker
BBa_B0010
1
BBa_B0010
T1 from E. coli rrnB
2003-11-19T12:00:00Z
2015-08-31T04:07:20Z
Transcriptional terminator consisting of a 64 bp stem-loop.
false
false
_1_
0
24
7
In stock
false
true
Randy Rettberg
annotation7018
1
BBa_B0010
range7018
1
1
80
annotation4184
1
stem_loop
range4184
1
12
55
BBa_M1636
1
BBa_M1636
Constitutive promoter emits green bioluminescence for positive control
2013-04-23T11:00:00Z
2015-05-08T01:13:57Z
Composite
Promoter binds hydrogen gas and emits green bioluminescence independent of pH
Promoter only turns on with Hydrogen gas
false
false
_768_
0
16143
9
Not in stock
false
Make sure the hydrogen binds and turns promoter on
false
Chauncey Tucker
component2216728
1
BBa_J23119
component2216738
1
BBa_B0015
component2216730
1
BBa_B0034
component2216731
1
BBa_M1635
annotation2216728
1
BBa_J23119
range2216728
1
1
35
annotation2216730
1
BBa_B0034
range2216730
1
44
55
annotation2216731
1
BBa_M1635
range2216731
1
62
2077
annotation2216738
1
BBa_B0015
range2216738
1
2086
2214
BBa_B0010_sequence
1
ccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctc
BBa_B0034_sequence
1
aaagaggagaaa
BBa_M1636_sequence
1
ttgacagctagctcagtcctaggtataatgctagctactagagaaagaggagaaatactagatggtcgacctgtgtgtcttccgtaaactgatattgcagagccgcgaaaaaaaaatgttatttacggcgccgaatccgaatacattgggtaaactctattgctggcgcaacgctctgcaatgtccctcggcgttcccgcatacggccagtaacatcaggtgtgatggcatcgcggtcatctcccgaattttccgtcattactgtcaggcccgaacgaaaagcagcaagctgtggattcaggatgaatgctcagttgacctttgtgagcagaaaatttttcatccccattacttctctctggtatactggtatggttgttcaacatgtcgtttgcatcctcgtacgctgtcccacggctatattaaaaccaatcttgtcttcactaccaggaagatattacctaaggtactggaagtaaaagatcggaccaactacatcaaaaggatcataattcttgacagtgaggaaaacctgttaggctgtgaatctctgcataattttatgagccgttattcggataataatctgcaaacgtttaaacctcttcattatgatcccgttgatcaggtggcagccatcctatgtagctcaggaaccacggggttgccaaagggtgtgatgcagactcatcgtaacatatgcgtgcgtctcacacacgcgagtgaccctagagtcggcacacagctgatcccgggtgtgtccgttctggcatatcttccatttttccatgcatttggcttttccataaatctggggtatttcatggttggcctgcgggtcgttatgttgcgcaggtttaatcaggaagttttcctgaaagcaatccaggattatgaggtccgcagtgtgataaacgttccgtcaaccattctgtttctgtccaagtctcctttggtcgataaatatgacttgctgtggcgcaactgcgtcgctgctcttcatcaccagaggaaactgttacgacagaatgacacatgccaggaatttgtggttgacatggttcaatccttactgcaattaatctacattttatttaccatgaacctcagccaagatcatttagaaaagtctttactgatctggctgaggaagattggcacgctggtgaaactgtgggatcagatcaaattagaaaattacgcgagcggcgtgctctggcaaaaagttacaaccatccacaaacctcctaaacgtttgcttatgactacggtaggattcactcttgagacactagataccatgatgcggatgaatatcagtatttggacagtgacccggaacctcctgaacattaaggctataagacacttgaataaacgcttttattataacattcaggttgaaatgcttttatccctggtgtttctgatcaaactcgagaactatcaactggggagctggctgaacaatcccgaacataatcttcaacagaaaaaattcaccatttttctgccgaacgggtcgttaattcaatccatctgtgtggaagaatttgattctctcatacaatatccgggcatgctccaggttaagttccaggagaaaaacttcgaaagacggtggaaaaaactgctgaacttcaaaagcctcgcctggattaaaaaagaatgggatatttttactaacaatatttggattaacgcgcctattaaaaaaaagaagaaattggtcgtagtggtggcagcgctgcactttccggttgtttcagccgctgtggttgtgttggtcgagccgatggagcgagccagctttacgagcacgttctgttggcgaaaaggaactcggaattggtggtgccgcacgtgctgttctattcggaagtgtaagtggacatgggggagtcaactgtttttcctgtctcgcaaacgtacatctaccctccagtactcgtgctctcagatcctaaactgcaataagtataatgcgcagaactcttactttattaatttgcagtgtttcttatattcttttatgctcgttttaatcaccatattctttaatttgatcttttaataatactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_B0012_sequence
1
tcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_J23119_sequence
1
ttgacagctagctcagtcctaggtataatgctagc
BBa_B0015_sequence
1
ccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_M1635_sequence
1
atggtcgacctgtgtgtcttccgtaaactgatattgcagagccgcgaaaaaaaaatgttatttacggcgccgaatccgaatacattgggtaaactctattgctggcgcaacgctctgcaatgtccctcggcgttcccgcatacggccagtaacatcaggtgtgatggcatcgcggtcatctcccgaattttccgtcattactgtcaggcccgaacgaaaagcagcaagctgtggattcaggatgaatgctcagttgacctttgtgagcagaaaatttttcatccccattacttctctctggtatactggtatggttgttcaacatgtcgtttgcatcctcgtacgctgtcccacggctatattaaaaccaatcttgtcttcactaccaggaagatattacctaaggtactggaagtaaaagatcggaccaactacatcaaaaggatcataattcttgacagtgaggaaaacctgttaggctgtgaatctctgcataattttatgagccgttattcggataataatctgcaaacgtttaaacctcttcattatgatcccgttgatcaggtggcagccatcctatgtagctcaggaaccacggggttgccaaagggtgtgatgcagactcatcgtaacatatgcgtgcgtctcacacacgcgagtgaccctagagtcggcacacagctgatcccgggtgtgtccgttctggcatatcttccatttttccatgcatttggcttttccataaatctggggtatttcatggttggcctgcgggtcgttatgttgcgcaggtttaatcaggaagttttcctgaaagcaatccaggattatgaggtccgcagtgtgataaacgttccgtcaaccattctgtttctgtccaagtctcctttggtcgataaatatgacttgctgtggcgcaactgcgtcgctgctcttcatcaccagaggaaactgttacgacagaatgacacatgccaggaatttgtggttgacatggttcaatccttactgcaattaatctacattttatttaccatgaacctcagccaagatcatttagaaaagtctttactgatctggctgaggaagattggcacgctggtgaaactgtgggatcagatcaaattagaaaattacgcgagcggcgtgctctggcaaaaagttacaaccatccacaaacctcctaaacgtttgcttatgactacggtaggattcactcttgagacactagataccatgatgcggatgaatatcagtatttggacagtgacccggaacctcctgaacattaaggctataagacacttgaataaacgcttttattataacattcaggttgaaatgcttttatccctggtgtttctgatcaaactcgagaactatcaactggggagctggctgaacaatcccgaacataatcttcaacagaaaaaattcaccatttttctgccgaacgggtcgttaattcaatccatctgtgtggaagaatttgattctctcatacaatatccgggcatgctccaggttaagttccaggagaaaaacttcgaaagacggtggaaaaaactgctgaacttcaaaagcctcgcctggattaaaaaagaatgggatatttttactaacaatatttggattaacgcgcctattaaaaaaaagaagaaattggtcgtagtggtggcagcgctgcactttccggttgtttcagccgctgtggttgtgttggtcgagccgatggagcgagccagctttacgagcacgttctgttggcgaaaaggaactcggaattggtggtgccgcacgtgctgttctattcggaagtgtaagtggacatgggggagtcaactgtttttcctgtctcgcaaacgtacatctaccctccagtactcgtgctctcagatcctaaactgcaataagtataatgcgcagaactcttactttattaatttgcagtgtttcttatattcttttatgctcgttttaatcaccatattctttaatttgatcttttaataa
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z