BBa_M31513
1
BBa_M31513
Refactored portion of M13 genome from unique Hpal site on gene II to the BamHI site on gene III
2007-02-26T12:00:00Z
2015-05-08T01:14:00Z
The source for this part was the genmoic sequence of the M13 bacteriophage
This part has been refactored so that the re-engineering of genes within the part are made easier. We used the methods outlined by researches that refactored the T7 genome,which required inserting 'buffer regions' in between genes that were overlapping or embedded in each other.
false
false
_102_
0
1382
102
Not in stock
false
We had to consider the fact that basepairs within the regions that encoded for genes could not be altered too much since we want to maintain functionality of M13 after refactoring this segment of its genome
false
Amirah Khan
annotation1915178
1
BamHI
range1915178
1
1307
1311
annotation1915210
1
gene X (ORF)
range1915210
1
496
831
annotation1915179
1
Eag1
range1915179
1
1312
1317
annotation1914990
1
promoter-g8
range1914990
1
1317
1364
annotation1914984
1
promoter-g10
range1914984
1
381
428
annotation1914996
1
BamHI
range1914996
1
2220
2224
annotation1914985
1
rbs-g10
range1914985
1
480
495
annotation1914994
1
rbs-g3
range1914994
1
1640
1655
annotation1914995
1
gene III (ORF) incomplete
range1914995
1
1656
2302
annotation1914993
1
promoter-g3
range1914993
1
1577
1624
annotation1914989
1
BsrGI
range1914989
1
1021
1025
annotation1914988
1
g5 (ORF)
range1914988
1
843
1106
annotation1915211
1
gene II (ORF) incomplete
range1915211
1
1
831
annotation1915002
1
gene IX (ORF)
range1915002
1
1206
1306
annotation1915171
1
rbs-g8
range1915171
1
1365
1381
annotation1914986
1
promoter g5
range1914986
1
786
835
annotation1914991
1
rbs-g9
range1914991
1
1190
1205
annotation1914987
1
rbs-g5
range1914987
1
827
842
annotation1914992
1
gene VIII
range1914992
1
1409
1630
BBa_M31513_sequence
1
aacgctactactattagtagaattgatgccaccttttcagctcgcgccccaaatgaaaatatagctaaacaggttattgaccatttgcgaaatgtatctaatggtcaaactaaatctactcgttcgcagaattgggaatcaactgttacatggaatgaaacttccagacaccgtactttagttgcatatttaaaacatgttgagctacagcaccagattcagcaattaagctctaagccatccgcaaaaatgacctcttatcaaaaggagcaattaaaggtactctctaatcctgacctgttggagtttgcttccggtctggttcgctttgaagctcgaattaaaacgcgatatttgaagtctttcgggcttcctcttaatctttttgatgcaatccgctttgcttctgactataatagtcagggtaaagacctgatttttgatttatggtcattctcgttttctgaactgtttaaagcatttgagggggattcaatgaatatttatgacgattccgcagtattggacgctatccagtctaaacattttactattaccccctctggcaaaacttcttttgcaaaagcctctcgctattttggtttttatcgtcgtctggtaaacgagggttatgatagtgttgctcttactatgcctcgtaattccttttggcgttatgtatctgcattagttgaatgtggtattcctaaatctcaactgatgaatctttctacctgtaataatgttgttccgttagttcgttttattaacgtagatttttcttcccaacgtcctgactggtataatgagccagttcttaaaatcgcataaggtaattcacaatgattaaagttgaaattaaaccatctcaagcccaatttactactcgttctggtgtttctcgtcagggcaagccttattcactgaatgagcagctttgttacgttgatttgggtaatgaatatccggttcttgtcaagattactcttgatgaaggtcagccagcctatgcgcctggtctgtacaccgttcatctgtcctctttcaaagttggtcagttcggttcccttatgattgaccgtctgcgcctcgttccagctaagtaacatggagcaggtcgcggatttcgacacaatttatcaggcgatgatacaaacctccgttgtactttgtttcgcgcttggtataatcgctgggggtcaaagatgagtgttttagtgtattctttcgcctctttcgttttaggttggtgccttcgtagtggcattacgtattttacccgtttaatgtaaacttcctcacgaaaggatccggccgaatctccgttgtactttgtttcgcgcttggtataatcgctgggggtctaatggaaacttcctcatgaagtctttagtcctcaaagcctctgtagccgttgctaccctcgttccgatgctgtctttcgctgctgagggtgacgatcccgcaaaagcggcctttaactccctgcaagcctcagcgaccgaatatatcggttatgcgtgggcgatggttgttgtcattgtcggcgcaactatcggtatcaagctgtttaagaaattcacctcgaaagcaagctgataaaccgatacaattaaaggctccttttggagcctttttttttggagattttcaacgtgaaaaaattattattcgcaattcctttagttgttcctttctattctcactccgctgaaactgttgaaagttgtttagcaaaaccccatacagaaaattcatttactaacgtctggaaagacgacaaaactttagatcgttacgctaactatgagggttgtctgtggaatgctacaggcgttgtagtttgtactggtgacgaaactcagtgttacggtacatgggttcctattgggcttgctatccctgaaaatgagggtggtggctctgagggtggcggttctgagggtggcggttctgagggtggcggtactaaacctcctgagtacggtgatacacctattccgggctatacttatatcaaccctctcgacggcacttatccgcctggtactgagcaaaaccccgctaatcctaatccttctcttgaggagtctcagcctcttaatactttcatgtttcagaataataggttccgaaataggcagggggcattaactgtttatacgggcactgttactcaaggcactgaccccgttaaaacttattaccagtacactcctgtatcatcaaaagccatgtatgacgcttactggaacggtaaattcagagactgcgctttccattctggctttaatgaggatcc
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z