BBa_M31969 1 BBa_M31969 M13K07 Gene III, truncated 2007-02-27T12:00:00Z 2015-05-08T01:14:01Z known sequence, genomic Stopped after Bam HI site false false _102_ 0 1381 102 Not in stock false none false Rebecca Adams BBa_M31960 1 BBa_M31960 Gene VII of M13K07 modified 2007-02-27T12:00:00Z 2015-05-08T01:14:01Z sequence/modified Modified to reduce repeats, same AA's present false false _102_ 0 1381 102 Not in stock false none false Rebecca Adams BBa_M31967 1 BfaI BfaI restriction enzyme site 2007-02-27T12:00:00Z 2015-05-08T01:14:01Z known sequence restriction site for BfaI false false _102_ 0 1381 102 Not in stock false none false Rebecca Adams BBa_M13509 1 BBa_M13509 M13Ko7 gene IX RBS 2006-12-14T12:00:00Z 2015-05-08T01:13:56Z New England Biolabs M13K07. Sequenced in 2002 by L. Panganaban This RBS is part of the bacteriophage M13 genome, initiating translation of the gene IX message (BBa_M13009). The part aligns with base pairs 1190-1205 in M13K07 genome. It was identified as the RBS for gene IX message by Wezenbeek et al in Gene (1980) 11: 129-148 false false _45_ 0 314 1 Not in stock false none false Natalie Kuldell BBa_M31964 1 BciVI BciVI restriction enzyme site 2007-02-27T12:00:00Z 2015-05-08T01:14:01Z known sequence restriction site false false _102_ 0 1381 102 Not in stock false none false Rebecca Adams BBa_M13503 1 BBa_M13503 M13K07 gene III RBS 2006-12-14T12:00:00Z 2015-05-08T01:13:56Z New England Biolabs M13K07. Sequenced in 2002 by L. Panganaban This RBS is part of the bacteriophage M13 genome, initiating translation of the gene III message (BBa_M13003). The part aligns with base pairs 1563-1578 in M13K07 genome. It was identified as the RBS for gene III message by Wezenbeek et al in Gene (1980) 11: 129-148 New England Biolabs M13K07. Sequenced in 2002 by L. Panganaban false false _45_ 0 314 1 Not in stock false none false Natalie Kuldell BBa_M13103 1 BBa_M13103 M13K07 gene III promoter 2006-12-15T12:00:00Z 2015-05-08T01:13:55Z New England Biolabs M13K07. Sequenced in 2002 by L. Panganaban. This part is from the bacteriophage M13 genome, bp 1500-1547 in M13K07. It directs transcription of M13 gene III (BBa_M13503, BBa_M13003). Its identity as a promoter was described in Gene (1980) 11:129-148 based on -10,-35 homology and fragment of genome able to bind RNAP. false true _45_ 0 314 1 Not in stock false none false Natalie Kuldell BBa_M13105 1 BBa_M13105 M13K07 gene V promoter 2006-12-15T12:00:00Z 2015-05-08T01:13:55Z New England Biolabs M13K07. Sequenced in 2002 by L. Panganaban. This part is from the bacteriophage M13 genome, bp 786-835 in M13K07. It directs transcription of M13 gene V (BBa_M13505, BBa_M13005). Its identity as a promoter was described in Gene (1980) 11:129-148 based on -10,-35 homology and fragment of genome able to bind RNAP. false false _45_ 0 314 1 Not in stock false none false Natalie Kuldell BBa_M31958 1 AseI AseI restriction enzyme site 2007-02-27T12:00:00Z 2015-05-08T01:14:01Z known sequence Restriction site false false _102_ 0 1381 102 Not in stock false none false Rebecca Adams BBa_M31952 1 AatII AatII restriction enzyme site 2007-02-27T12:00:00Z 2015-05-08T01:14:01Z known it sequence restriction site false false _102_ 0 1381 102 Not in stock false none false Rebecca Adams BBa_M31971 1 BBa_M31971 M13K07 modified, from HpaI to BamHI site 2007-02-27T12:00:00Z 2015-05-08T01:14:01Z genomic sequence with modifications modified by Rebecca Adams to separate genes, promoters, and RBS's in order to make refactoring easier. false false _102_ 0 1381 102 Not in stock false none false Rebecca Adams component1917027 1 BBa_M31967 component1917003 1 BBa_M31951 component1917018 1 BBa_M31961 component1917023 1 BBa_M31965 component1917007 1 BBa_M13510 component1917020 1 BBa_M13509 component1917026 1 BBa_M31966 component1917031 1 BBa_M31969 component1917019 1 BBa_M31962 component1917015 1 BBa_M31959 component1917004 1 BBa_M31952 component1917005 1 BBa_M31953 component1917010 1 BBa_M31956 component1917016 1 BBa_M13507 component1917030 1 BBa_M13503 component1917021 1 BBa_M31963 component1917014 1 BBa_M31958 component1917009 1 BBa_M31955 component1917012 1 BBa_M13505 component1917029 1 BBa_M13103 component1917006 1 BBa_M13110 component1917017 1 BBa_M31960 component1917028 1 BBa_M31968 component1917024 1 BBa_M13108 component1917011 1 BBa_M13105 component1917008 1 BBa_M31954 component1917013 1 BBa_M31957 component1917022 1 BBa_M31964 component1917002 1 BBa_M31950 component1917025 1 BBa_M13508 annotation1917020 1 BBa_M13509 range1917020 1 1869 1884 annotation1917019 1 BBa_M31962 range1917019 1 1856 1860 annotation1917027 1 BBa_M31967 range1917027 1 2333 2336 annotation1917007 1 BBa_M13510 range1917007 1 935 950 annotation1917015 1 BBa_M31959 range1917015 1 1695 1700 annotation1917029 1 BBa_M13103 range1917029 1 2359 2406 annotation1917016 1 BBa_M13507 range1917016 1 1709 1724 annotation1917017 1 BBa_M31960 range1917017 1 1731 1832 annotation1917025 1 BBa_M13508 range1917025 1 2081 2096 annotation1917026 1 BBa_M31966 range1917026 1 2103 2324 annotation1917014 1 BBa_M31958 range1917014 1 1681 1686 annotation1917030 1 BBa_M13503 range1917030 1 2415 2430 annotation1917031 1 BBa_M31969 range1917031 1 2439 3084 annotation1917009 1 BBa_M31955 range1917009 1 1301 1306 annotation1917013 1 BBa_M31957 range1917013 1 1409 1672 annotation1917002 1 BBa_M31950 range1917002 1 1 3 annotation1917008 1 BBa_M31954 range1917008 1 957 1292 annotation1917006 1 BBa_M13110 range1917006 1 879 926 annotation1917021 1 BBa_M31963 range1917021 1 1891 1989 annotation1917028 1 BBa_M31968 range1917028 1 2345 2350 annotation1917022 1 BBa_M31964 range1917022 1 1998 2003 annotation1917003 1 BBa_M31951 range1917003 1 12 842 annotation1917004 1 BBa_M31952 range1917004 1 851 856 annotation1917012 1 BBa_M13505 range1917012 1 1387 1402 annotation1917010 1 BBa_M31956 range1917010 1 1315 1320 annotation1917011 1 BBa_M13105 range1917011 1 1329 1378 annotation1917018 1 BBa_M31961 range1917018 1 1841 1847 annotation1917023 1 BBa_M31965 range1917023 1 2012 2017 annotation1917005 1 BBa_M31953 range1917005 1 865 870 annotation1917024 1 BBa_M13108 range1917024 1 2026 2072 BBa_M31957 1 BBa_M31957 Gene V of M13K07, modified 2007-02-27T12:00:00Z 2015-05-08T01:14:01Z genomic sequence modified to reduce repeats, no AA changes false false _102_ 0 1381 102 Not in stock false none false Rebecca Adams BBa_M31966 1 BBa_M31966 Gene VIII, M13K07 modified 2007-02-27T12:00:00Z 2015-05-08T01:14:01Z modified genomic modified, same AA sequence false false _102_ 0 1381 102 Not in stock false none false Rebecca Adams BBa_M31951 1 BBa_M31951 part of Gene II of M13K07 2007-02-27T12:00:00Z 2015-05-08T01:14:01Z genomic sequence Last part of Gene II, after the HpaI false false _102_ 0 1381 102 Not in stock false none false Rebecca Adams BBa_M13505 1 BBa_M13505 M13KO7 gene V RBS 2006-12-14T12:00:00Z 2015-05-08T01:13:56Z New England Biolabs M13K07. Sequenced in 2002 by L. Panganaban This RBS is part of the bacteriophage M13 genome, initiating translation of the gene V message (BBa_M13005). The part aligns with base pairs 827-842 in M13K07 genome. It was identified as the RBS for the gene V message by Wezenbeek et al in Gene (1980) 11: 129-148 false false _45_ 0 314 1 Not in stock false none false Natalie Kuldell BBa_M13507 1 BBa_M13507 M13KO7 gene VII RBS 2006-12-14T12:00:00Z 2015-05-08T01:13:56Z New England Biolabs M13K07. Sequenced in 2002 by L. Panganaban This RBS is part of the bacteriophage M13 genome, initiating translation of the gene VII message (BBa_M13007). The part aligns with base pairs 1092-1107 in M13K07 genome. It was identified as the RBS for gene VII message by Wezenbeek et al in Gene (1980) 11: 129-148 false true _45_ 0 314 1 Not in stock false New England Biolabs M13K07. Sequenced in 2002 by L. Panganaban false Natalie Kuldell BBa_M31955 1 ApaI ApaI restriction enzyme site 2007-02-27T12:00:00Z 2015-05-08T01:14:01Z Known cut site Restriction site false true _102_ 0 1381 102 Not in stock false none false Rebecca Adams BBa_M31968 1 BfuAI BfuAI restriction enzyme site 2007-02-27T12:00:00Z 2015-05-08T01:14:01Z known sequence restriction site false false _102_ 0 1381 102 Not in stock false none false Rebecca Adams BBa_M13110 1 BBa_M13110 M13110 2006-12-15T12:00:00Z 2015-05-08T01:13:55Z New England Biolabs M13K07. Sequenced in 2002 by L. Panganaban. This part is from the bacteriophage M13 genome, bp 381-428 in M13K07. It directs transcription of M13 gene X (BBa_M13510, BBa_M13010). Its identity as a promoter was described in Gene (1980) 11:129-148 based on -10,-35 homology and fragment of genome able to bind RNAP. false false _45_ 0 314 1 Not in stock false none false Natalie Kuldell BBa_M13510 1 BBa_M13510 M13KO7 gene X RBS 2006-12-14T12:00:00Z 2015-05-08T01:13:56Z New England Biolabs M13K07. Sequenced in 2002 by L. Panganaban This RBS is part of the bacteriophage M13 genome, initiating translation of the gene X message (BBa_M13010). The part aligns with base pairs 480-495 in M13K07 genome. It was identified as the RBS for gene II message by Wezenbeek et al in Gene (1980) 11: 129-148 false false _45_ 0 314 1 Not in stock false none false Natalie Kuldell BBa_M31956 1 AfeI AfeI restriction enzyme site 2007-02-27T12:00:00Z 2015-05-08T01:14:01Z known sequence Restriction site false false _102_ 0 1381 102 Not in stock false none false Rebecca Adams BBa_M13508 1 BBa_M13508 M13K07 gene VIII RBS 2006-12-14T12:00:00Z 2015-05-08T01:13:56Z New England Biolabs M13K07. Sequenced in 2002 by L. Panganaban This RBS is part of the bacteriophage M13 genome, initiating translation of the gene VIII message (BBa_M13008). The part aligns with base pairs 1285-1300 in M13K07 genome. It was identified as the RBS for gene VIII message by Wezenbeek et al in Gene (1980) 11: 129-148 false true _45_ 0 314 1 Not in stock false none false Natalie Kuldell BBa_M31953 1 Acc65I Acc65I restriction enzyme site 2007-02-27T12:00:00Z 2015-05-08T01:14:01Z known sequence Restriction site false true _102_ 0 1381 102 Not in stock false none false Rebecca Adams BBa_M31950 1 HpaI HpaI restriction enzyme site 2007-02-27T12:00:00Z 2015-05-08T01:14:01Z standard, restriction site This is a restriction site. false false _102_ 0 1381 102 Not in stock false none false Rebecca Adams BBa_M31954 1 BBa_M31954 Gene X, M13K07 modified 2007-02-27T12:00:00Z 2015-05-08T01:14:01Z genomic sequence Entire gene with modifications due to overlapps false false _102_ 0 1381 102 Not in stock false unknown/none false Rebecca Adams BBa_M31959 1 AvrII AvrII restriction enzyme site 2007-02-27T12:00:00Z 2015-05-08T01:14:01Z known sequence Restriction site false false _102_ 0 1381 102 Not in stock false none false Rebecca Adams BBa_M31961 1 BbvCI BbvCI restriction enzyme site 2007-02-27T12:00:00Z 2015-05-08T01:14:01Z known sequence restriction site false false _102_ 0 1381 102 Not in stock false none false Rebecca Adams BBa_M31963 1 BBa_M31963 Gene IX, modified 2007-02-27T12:00:00Z 2015-05-08T01:14:01Z modified M13K07, modified false false _102_ 0 1381 102 Not in stock false none false Rebecca Adams BBa_M31962 1 BccI BccI restriction enzyme site 2007-02-27T12:00:00Z 2015-05-08T01:14:01Z known sequence restriction site false false _102_ 0 1381 102 Not in stock false none false Rebecca Adams BBa_M13108 1 BBa_M13108 M13K07 gene VIII promoter 2006-12-15T12:00:00Z 2015-05-08T01:13:55Z New England Biolabs M13K07. Sequenced in 2002 by L. Panganaban. This part is from the bacteriophage M13 genome, bp 1155-1201 in M13K07. It directs transcription of M13 gene VIII (BBa_M13508, BBa_M13008). Its identity as a promoter was described in Gene (1980) 11:129-148 based on -10,-35 homology and fragment of genome able to bind RNAP. false true _45_ 0 314 1 Not in stock false none false Natalie Kuldell BBa_M31965 1 BclI BclI restriction enzyme site 2007-02-27T12:00:00Z 2015-05-08T01:14:01Z known sequence restriction site false true _102_ 0 1381 102 Not in stock false none false Rebecca Adams BBa_M31950_sequence 1 gtt BBa_M31966_sequence 1 atgaaaaagtctttagtcctcaaagcctctgtagccgttgctaccctcgttccgatgctgtctttcgctgctgagggtgacgatcccgcaaaagcggcctttaactccctgcaagcctcagcgaccgaatatatcggttatgcgtgggcgatggttgttgtcattgtcggcgcaactatcggtatcaagctgtttaagaagtttacctcaaaggctagttga BBa_M31951_sequence 1 aacgctactactattagtagaattgatgccaccttttcagctcgcgccccaaatgaaaatatagctaaacaggttattgaccatttgcgaaatgtatctaatggtcaaactaaatctactcgttcgcagaattgggaatcaactgttacatggaatgaaacttccagacaccgtactttagttgcatatttaaaacatgttgagctacagcaccagattcagcaattaagctctaagccatccgcaaaaatgacctcttatcaaaaggagcaattaaaggtactctctaatcctgacctgttggagtttgcttccggtctggttcgctttgaagctcgaattaaaacgcgatatttgaagtctttcgggcttcctcttaacctctttgacgctatccgtttcgcatcagattacaacagtcaaggaaaagacctgatttttgatttatggtcattctcgttttctgaactgtttaaagcattcgaaggtgactcgatgaacatctacgatgactcagccgttttagatgctattcaatcaaaacactttacaatcaccccatcaggcaagacatctttcgccaaagcatcacgctacttcggtttctaccgtcgactcgtaaatgatggttacgacagcgttgcactcactatgccccgtaattctttctggcgatacgtatcagctttagtcgagtgtggaatccctaagtcccaactaatgaacctttccacttgcaacaatgtcgtaccattggtccgattcattaatgtggacttttcatctcaacgccctgattggtacaatgaaccagtccttaagatcgcgtaa BBa_M31962_sequence 1 ccatc BBa_M13108_sequence 1 aatctccgttgtactttgtttcgcgcttggtataatcgctgggggtc BBa_M13507_sequence 1 gttccggctaagtaac BBa_M31955_sequence 1 gggccc BBa_M31967_sequence 1 ctag BBa_M31954_sequence 1 atgaatatttatgacgattccgcagtattggacgctatccagtctaaacattttactattaccccctctggcaaaacttcttttgcaaaagcctctcgctattttggtttttatcgtcgtctggtaaacgagggttatgatagtgttgctcttactatgcctcgtaattccttttggcgttatgtatctgcattagttgaatgtggtattcctaaatctcaactgatgaatctttctacctgtaataatgttgttccgttagttcgttttattaacgtagatttttcttcccaacgtcctgactggtataatgagccagttcttaaaatcgcataa BBa_M13510_sequence 1 atttgagggggattca BBa_M13103_sequence 1 aattcacctcgaaagcaagctgataaaccgatacaattaaaggctcct BBa_M31964_sequence 1 gtatcc BBa_M31957_sequence 1 atgattaaagttgaaattaaaccatctcaagcccaatttactactcgttctggtgtttctcgtcagggcaagccttattcactgaatgagcagctttgttacgttgatttgggtaatgaatatccggttcttgtcaagattactcttgatgaaggtcagccagcctatgcgcctggtctgtacaccgttcatctgtcctctttcaaagttggtcagttcggttcccttatgattgaccgtctgcgcctcgtcccagctaaatag BBa_M31968_sequence 1 acctgc BBa_M31956_sequence 1 agcgct BBa_M31953_sequence 1 ggtacc BBa_M31958_sequence 1 attaat BBa_M13509_sequence 1 tcgctgggggtcaaag BBa_M13110_sequence 1 tctttttgatgcaatccgctttgcttctgactataatagtcagggtaa BBa_M31961_sequence 1 cctcagc BBa_M31963_sequence 1 atgagtgttttagtgtattctttcgcctctttcgttttaggttggtgccttcgtagtggcattacgtattttacccgtttgatggagacctcttcatga BBa_M13503_sequence 1 tttggagattttcaac BBa_M13105_sequence 1 ccaacgtcctgactggtataatgagccagttcttaaaatcgcataaggta BBa_M31959_sequence 1 cctagg BBa_M31960_sequence 1 atggagcaggtcgcggatttcgacacaatttatcaggcgatgatacaaatttcagtcgtgctttgctttgcgctcggtatcattgctggaggacagagatga BBa_M31952_sequence 1 gacgtc BBa_M31971_sequence 1 gtttactagagaacgctactactattagtagaattgatgccaccttttcagctcgcgccccaaatgaaaatatagctaaacaggttattgaccatttgcgaaatgtatctaatggtcaaactaaatctactcgttcgcagaattgggaatcaactgttacatggaatgaaacttccagacaccgtactttagttgcatatttaaaacatgttgagctacagcaccagattcagcaattaagctctaagccatccgcaaaaatgacctcttatcaaaaggagcaattaaaggtactctctaatcctgacctgttggagtttgcttccggtctggttcgctttgaagctcgaattaaaacgcgatatttgaagtctttcgggcttcctcttaacctctttgacgctatccgtttcgcatcagattacaacagtcaaggaaaagacctgatttttgatttatggtcattctcgttttctgaactgtttaaagcattcgaaggtgactcgatgaacatctacgatgactcagccgttttagatgctattcaatcaaaacactttacaatcaccccatcaggcaagacatctttcgccaaagcatcacgctacttcggtttctaccgtcgactcgtaaatgatggttacgacagcgttgcactcactatgccccgtaattctttctggcgatacgtatcagctttagtcgagtgtggaatccctaagtcccaactaatgaacctttccacttgcaacaatgtcgtaccattggtccgattcattaatgtggacttttcatctcaacgccctgattggtacaatgaaccagtccttaagatcgcgtaatactagaggacgtctactagagggtacctactagagtctttttgatgcaatccgctttgcttctgactataatagtcagggtaatactagagatttgagggggattcatactagatgaatatttatgacgattccgcagtattggacgctatccagtctaaacattttactattaccccctctggcaaaacttcttttgcaaaagcctctcgctattttggtttttatcgtcgtctggtaaacgagggttatgatagtgttgctcttactatgcctcgtaattccttttggcgttatgtatctgcattagttgaatgtggtattcctaaatctcaactgatgaatctttctacctgtaataatgttgttccgttagttcgttttattaacgtagatttttcttcccaacgtcctgactggtataatgagccagttcttaaaatcgcataatactagaggggccctactagagagcgcttactagagccaacgtcctgactggtataatgagccagttcttaaaatcgcataaggtatactagagcataaggtaattcacatactagatgattaaagttgaaattaaaccatctcaagcccaatttactactcgttctggtgtttctcgtcagggcaagccttattcactgaatgagcagctttgttacgttgatttgggtaatgaatatccggttcttgtcaagattactcttgatgaaggtcagccagcctatgcgcctggtctgtacaccgttcatctgtcctctttcaaagttggtcagttcggttcccttatgattgaccgtctgcgcctcgtcccagctaaatagtactagagattaattactagagcctaggtactagaggttccggctaagtaactactagatggagcaggtcgcggatttcgacacaatttatcaggcgatgatacaaatttcagtcgtgctttgctttgcgctcggtatcattgctggaggacagagatgatactagagcctcagctactagagccatctactagagtcgctgggggtcaaagtactagatgagtgttttagtgtattctttcgcctctttcgttttaggttggtgccttcgtagtggcattacgtattttacccgtttgatggagacctcttcatgatactagaggtatcctactagagtgatcatactagagaatctccgttgtactttgtttcgcgcttggtataatcgctgggggtctactagagtaatggaaacttcctctactagatgaaaaagtctttagtcctcaaagcctctgtagccgttgctaccctcgttccgatgctgtctttcgctgctgagggtgacgatcccgcaaaagcggcctttaactccctgcaagcctcagcgaccgaatatatcggttatgcgtgggcgatggttgttgtcattgtcggcgcaactatcggtatcaagctgtttaagaagtttacctcaaaggctagttgatactagagctagtactagagacctgctactagagaattcacctcgaaagcaagctgataaaccgatacaattaaaggctccttactagagtttggagattttcaactactagaggtgaaaaaattattattcgcaattcctttagttgttcctttctattctcactccgctgaaactgttgaaagttgtttagcaaaaccccatacagaaaattcatttactaacgtctggaaagacgacaaaactttagatcgttacgctaactatgagggttgtctgtggaatgctacaggcgttgtagtttgtactggtgacgaaactcagtgttacggtacatgggttcctattgggcttgctatccctgaaaatgagggtggtggctctgagggtggcggttctgagggtggcggttctgagggtggcggtactaaacctcctgagtacggtgatacacctattccgggctatacttatatcaaccctctcgacggcacttatccgcctggtactgagcaaaaccccgctaatcctaatccttctcttgaggagtctcagcctcttaatactttcatgtttcagaataataggttccgaaataggcagggggcattaactgtttatacgggcactgttactcaaggcactgaccccgttaaaacttattaccagtacactcctgtatcatcaaaagccatgtatgacgcttactggaacggtaaattcagagactgcgctttccattctggctttaatgaggatc BBa_M31965_sequence 1 tgatca BBa_M31969_sequence 1 gtgaaaaaattattattcgcaattcctttagttgttcctttctattctcactccgctgaaactgttgaaagttgtttagcaaaaccccatacagaaaattcatttactaacgtctggaaagacgacaaaactttagatcgttacgctaactatgagggttgtctgtggaatgctacaggcgttgtagtttgtactggtgacgaaactcagtgttacggtacatgggttcctattgggcttgctatccctgaaaatgagggtggtggctctgagggtggcggttctgagggtggcggttctgagggtggcggtactaaacctcctgagtacggtgatacacctattccgggctatacttatatcaaccctctcgacggcacttatccgcctggtactgagcaaaaccccgctaatcctaatccttctcttgaggagtctcagcctcttaatactttcatgtttcagaataataggttccgaaataggcagggggcattaactgtttatacgggcactgttactcaaggcactgaccccgttaaaacttattaccagtacactcctgtatcatcaaaagccatgtatgacgcttactggaacggtaaattcagagactgcgctttccattctggctttaatgaggatc BBa_M13508_sequence 1 taatggaaacttcctc BBa_M13505_sequence 1 cataaggtaattcaca igem2sbol 1 iGEM to SBOL conversion Conversion of the iGEM parts registry to SBOL2.1 James Alastair McLaughlin Chris J. Myers 2017-03-06T15:00:00.000Z