BBa_M36344
1
BBa_M36344
Actuator for Grape Scent
2012-12-04T12:00:00Z
2015-05-08T01:14:04Z
The amino acid sequence is from the UniProt database originating from the below paper.
Wang, J., De Luca, V. ???The biosynthesis and regulation of biosynthesis of Concord grape fruit esters, including ???foxy??? methylanthranilate.??? The Plant Journal. 2005. Vol. 44, pp. 606-619.
Our gene produces the AMAT enzyme (Anthraniloyl-coenzymeA: methanol acyltransferase), which catalyzes the reaction between anthraniloyl coA and methanol to produce methyl anthranilate.
false
false
_848_
0
15027
9
Not in stock
false
We obtained the original amino acid sequence and used OPTIMIZER, referenced below, to arrive at the desired nucleotide sequence. A base pair had to be modified from this codon translation to avoid a palindrome in the nucleotide sequence. Specifically, base pair 1078 of our sequence was changed from a G to a C.
Puigb??, P., Guzm??n, E., Romeu A., and Garcia-Vallv?? S. ???OPTIMIZER: a web server for optimizing the codon usage of DNA sequences.??? Nucleic Acids Res. July, 2007. Issue 35.
false
Chris Aholt, Arjun Bhargava, Nikhil Bhargava
annotation2251379
1
polya
range2251379
1
1894
1907
annotation2251369
1
stem_loop
range2251369
1
1653
1696
annotation2251363
1
BBa_M36282
range2251363
1
193
280
annotation2251362
1
Start Codon
range2251362
1
182
184
annotation2251364
1
Start Codon
range2251364
1
278
280
annotation2251368
1
BBa_B0010
range2251368
1
1642
1721
annotation2251378
1
T7 TE
range2251378
1
1874
1893
annotation2251377
1
BBa_B0012
range2251377
1
1867
1907
annotation2251366
1
point mutation to avoid palindrome
range2251366
1
1270
1270
annotation2251384
1
T7 TE
range2251384
1
2011
2030
annotation2251376
1
stem_loop
range2251376
1
1790
1833
annotation2251367
1
BBa_B0015
range2251367
1
1642
1770
annotation2251360
1
BBa_M36282
range2251360
1
1
88
annotation2251383
1
BBa_B0012
range2251383
1
2004
2044
annotation2251373
1
stop
range2251373
1
1763
1763
annotation2251381
1
BBa_B0010
range2251381
1
1916
1995
annotation2251372
1
polya
range2251372
1
1757
1770
annotation2251387
1
BBa_B0015
range2251387
1
1916
2044
annotation2251359
1
Start Codon
range2251359
1
86
88
annotation2251371
1
T7 TE
range2251371
1
1737
1756
annotation2251385
1
polya
range2251385
1
2031
2044
annotation2251380
1
stop
range2251380
1
1900
1900
annotation2251370
1
BBa_B0012
range2251370
1
1730
1770
annotation2251374
1
BBa_B0010
range2251374
1
1779
1858
annotation2251375
1
BBa_B0015
range2251375
1
1779
1907
annotation2251386
1
stop
range2251386
1
2037
2037
annotation2251361
1
BBa_M36282
range2251361
1
97
184
annotation2251382
1
stem_loop
range2251382
1
1927
1970
annotation2251365
1
BBa_M36344
range2251365
1
287
1633
BBa_M36344_sequence
1
gggcccaagttcacttaaaaaggagatcaacaatgaaagcaattttcgtactgaaacatcttaatcatgctaaggaggttttctaatgtactagaggggcccaagttcacttaaaaaggagatcaacaatgaaagcaattttcgtactgaaacatcttaatcatgctaaggaggttttctaatgtactagaggggcccaagttcacttaaaaaggagatcaacaatgaaagcaattttcgtactgaaacatcttaatcatgctaaggaggttttctaatgtactagatggcgtctccgtcttctccgctggttttctctgttaaccgttgcgttccgcagatcgttcgtccggcgaacccgaccccgcgtgaagttaaacagctgtctgacatcgacgaccaggaaggtcgtcgtttccagatcccggttatcatgttctaccgtaacaacccgctgatggaaggtaaagacccggttaaagttatccgtgaagcgctgggtaaagcgctggtttactactacccgttcgcgggtcgtctgatcgaaggtgacaaccgtaaactgatggttgactgcaccggtgaaggtgttctgttcatcgaagcggacgcggacaccaccctggaaaacctgggtgacgcgatccagccgatgtgcccgtgcttcgaagaactgctgtacgacgttccgggttctaccaccatcctgggttctccgctgatcctgatccaggttacccgtctgcgttgcggtggtttcatcttcgcgctgcgtctgaaccacaccatgtctgacgcggcgggtctgatccagttcctggacaccatcggtgaaatggcgcagggtctgtctgttccgtctctgctgccgatctggcagcgtgaactgctgaacgcgcgtaacccgccgcgtatcacccgtatccaccacgaatacgaaaaagttaccaacaccaaaggtaccctgatggcgatggacgaaaactctctggttcaccgttctttcttcttcggtcgtgaagaaatccgtgcgctgcgtaaccgtctgccggcgtctctgggtgcgtgctctaccttcgaagttctgatggcgtgcgtttggcgttgccgtaccatcgcgttcgcggttgacccggacgaagttgttcgtatctcttgcatcatcaacatgcgtggtaaacacggtttcgaactgccgccgggttactacggtaacgcgttcgttaccccggcgtctatcaccaaagcgggtatgctgtgcaaaaacccgctggaattcgcgatccgtctggttaaaaaagcgaaagcggaaatgtctcaggaatacatcaaatctgttgcggacctgatggttatcaaaggtcgtccgctgttcacccagccgggtaacttcaccgtttctgacgttacccgtgcgggtctgggtgaagttgacttcggttggggtaaacctgtttacggtggtgttgcgcgtgcgtgcccgatcatctctttccgtatgctgttccgtaactctaaaggtgaagaaggttctgttatcccgatctggctgccgccgccggttatggaacgtttcgaacaggaactgaaacgtatgaccaaaaaagcggaactgctgatcacctctatgctgtactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttatatactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttatatactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z