BBa_E2050
1
mRFP1
derivative of mRFP1, yeast-optimized
2005-01-24T12:00:00Z
2016-01-25T02:35:54Z
Shaner et al, 2004. Nat Biotech (22):1567-1571
Released HQ 2013
mRFP derivative. Ex548nm/Em562. yeast codon optimized.
false
false
_8_
4206
230
7
In stock
false
Contains N- and C-terminal linker sequences (with homology to biobrick parts BBa_E2060 (mCherry), BBa_E2020 (Cerulean CFP), and BBa_E2030 (Venus YFP) to facilitate color swapping in yeast. Adds N-"MATSG" and "GSGTA"-C. to published amino acid sequence. Double TAATAA stop codon. Missing EcoRI, HindIII, NotI, NdeI, XhoI, RsrII, BamHI, NcoI, BglI, SpeI, XbaI, and PstI. except for 5' and 3' ends no significant sequence identity runs to mCherry (BBa_E2060).
true
ryu
annotation1431919
1
GSGTA linker
range1431919
1
724
738
annotation2214024
1
Help:Barcodes
range2214024
1
745
769
annotation1431920
1
mOrange
range1431920
1
1
738
annotation1431915
1
MATSG linker
range1431915
1
1
15
BBa_M36529
1
BBa_M36529
In presence of lactose, produces mCherry
2015-10-21T11:00:00Z
2015-12-03T07:26:17Z
mCherry, Ptet
In previous part, creation of lacI protein represses the expression of mCherry. This occurs in the presence of lactose, and another part used in tandem controls the expression levels of mCherry by varying the expression of LacI.
true
false
_848_
29107
29107
9
false
Ptet specialized to fit yeast
false
Valerie Wesley Scott
component2478342
1
BBa_M36526
component2478348
1
BBa_E2050
component2478343
1
BBa_M36527
annotation2478348
1
BBa_E2050
range2478348
1
65
833
annotation2478343
1
BBa_M36527
range2478343
1
21
58
annotation2478342
1
BBa_M36526
range2478342
1
1
12
BBa_M36527
1
BBa_M36527
Lactose inducible yeast promoter
2015-10-22T11:00:00Z
2016-02-10T02:35:24Z
Was extracted from the BBa_K1164004 part on iGem's Registry of Standard Biological Parts.
In the presence of LacI, this sequence represses gene expression. Expression can be induced by the addition of lactose or IPTG, which binds to LacI, removing it from the DNA.
false
false
_848_
4206
29107
9
false
Had to ensure that it would work in yeast and where to put this with regards to the Kozak sequence and protein coding region. Ended up being placed directly before the Kozak sequence.
false
Valerie Wesley Scott
BBa_M36526
1
BBa_M36526
Kozak
2015-10-22T11:00:00Z
2015-12-03T07:22:38Z
Was from part BBa_K792012 on igem's Registry of Standard Biological Parts
A kozak sequence for yeast. Is missing the last three base pairs (ATG) which should be the first three of your protein coding section. Should be placed directly before this protein coding section
true
false
_848_
29107
29107
9
false
Wanted to ensure that it would work in yeast and several other igem projects said it was used successfully.
false
Valerie Wesley Scott
BBa_E2050_sequence
1
atggcaactagcggcatggttagtaaaggagaagaaaacaatatggcaatcataaaagaatttatgagattcaaagtcagaatggaaggttctgtaaatggtcacgagttcgaaatagaaggggaaggtgaaggtagaccctatgaaggctttcaaacggctaaattaaaagttaccaagggtggaccattgccctttgcttgggatatcctgtctcctcagttcacttatggtagtaaagcctatgttaagcatcctgctgatattcctgattacttcaagttgagttttccagaaggtttcaaatgggagagagttatgaattttgaagatggcggagttgtgacagtgacacaagactcctcacttcaagacggtgagtttatttacaaggtaaaactacgtggcactaactttccgtcggatggaccagtcatgcaaaaaaagacgatgggttgggaggcttcatctgagcgaatgtatccagaagatggggcactaaagggcgaaattaagatgaggctcaaattaaaggatggtggacattatacctcggaagtgaaaactacctataaagccaaaaagccagttcaattacctggtgcatacattgttggcattaagttggacatcacaagccacaatgaagattatacaatagtagagcagtacgaacgcgcggaaggtaggcattctactggaggcatggatgaactatacaaaggttctggtaccgcataataactctgatagtgctagtgtagatctc
BBa_M36529_sequence
1
cccgccgccacctactagagtgttgtgtggaattgtgagcggataacaatttcacacatactagatggcaactagcggcatggttagtaaaggagaagaaaacaatatggcaatcataaaagaatttatgagattcaaagtcagaatggaaggttctgtaaatggtcacgagttcgaaatagaaggggaaggtgaaggtagaccctatgaaggctttcaaacggctaaattaaaagttaccaagggtggaccattgccctttgcttgggatatcctgtctcctcagttcacttatggtagtaaagcctatgttaagcatcctgctgatattcctgattacttcaagttgagttttccagaaggtttcaaatgggagagagttatgaattttgaagatggcggagttgtgacagtgacacaagactcctcacttcaagacggtgagtttatttacaaggtaaaactacgtggcactaactttccgtcggatggaccagtcatgcaaaaaaagacgatgggttgggaggcttcatctgagcgaatgtatccagaagatggggcactaaagggcgaaattaagatgaggctcaaattaaaggatggtggacattatacctcggaagtgaaaactacctataaagccaaaaagccagttcaattacctggtgcatacattgttggcattaagttggacatcacaagccacaatgaagattatacaatagtagagcagtacgaacgcgcggaaggtaggcattctactggaggcatggatgaactatacaaaggttctggtaccgcataataactctgatagtgctagtgtagatctc
BBa_M36526_sequence
1
cccgccgccacc
BBa_M36527_sequence
1
cctctcctttttgaaatattatgcagaggttgcgcggcgtgcactgggcgcggggcaggtataaaggtgggtggtttggggtgtgtggaattgtgagcggataacaatttcacacaacgtagggggcgaacggcgagattaaaagtatcaacaaaaaatgatggtggttggtttgtgtggaaagaaatgcgagccatgtttccggatctatccc
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z