BBa_M36631
1
BBa_M36631
AFP Preproprotein with FLAG Epitope
2015-10-23T11:00:00Z
2015-10-30T07:47:12Z
AFP protein derived from Aspergillus giganteus. See Part:BBa_M36623 for more details.
Standard FLAG epitope. See Part:BBa_M36629 for more details.
AFP antifungal preproprotein (94 AA peptide) tagged at the C-terminus with a FLAG epitope
false
false
_848_
29103
29103
9
false
The construct was made to be within a 1500bp limit with less than 5 repeats of >= 10bp, and no BsaI, BbsI, or BsmBI restriction sites.
false
Benjamin Yeh, Jodie Sheffels, Ali Hoffer
component2478353
1
BBa_M36629
component2478352
1
BBa_M36623
annotation2478353
1
BBa_M36629
range2478353
1
291
314
annotation2478352
1
BBa_M36623
range2478352
1
1
282
BBa_M36629
1
BBa_M36629
FLAG Epitope
2015-10-23T11:00:00Z
2015-10-24T05:34:12Z
The DNA sequence was generated from the amino acid sequence (DYKDDDDK) using IDT Codon Optimizer for E. coli K12. It was then modified to remove certain restriction sites and repeats.
Encodes the FLAG epitope, which has the amino acid sequence of DYKDDDDK. Can be added to either the N- or C- terminus of a protein. No start codon included.
false
false
_848_
29103
29103
9
false
1. Avoid BsaI, BbsI, and BsmBI restriction sites
2. Avoid repeats over 10bp in length.
false
Benjamin Yeh, Jodie Sheffels, Ali Hoffer
BBa_M36623
1
BBa_M36623
Antifungal protein from Aspergillus giganteus
2015-10-21T11:00:00Z
2015-10-22T05:42:16Z
http://www.ncbi.nlm.nih.gov/pubmed/8082203
This part codes for an antifungal protein produced naturally by Aspergillus giganteus, a mold species in the fungi kingdom. It appears to be involved in the inhibition of chitin synthesis (chitin being a protein that fungi rely on to build their cell walls). We plan to produce this protein in E. coli for potential use in combating plant-pathogenic fungi.
false
false
_848_
29103
29100
9
false
This pre-protein is 94 amino acids upon translation, but is later cleaved into a 51 amino acid-long peptide. This 51 amino acid version is the active version.
false
Jodie Sheffels, Benjamin Yeh, Ali Hoffer
BBa_M36631_sequence
1
atgaaattcgtgagcttagcgtccctggggttcgccctcgtggccgccttgggcgcggtggctaccccggttgaagcagattcgctgaccgcgggtgggctggacgcgcgcgatgaatccgcggtactggccacttataatggtaaatgttacaaaaaagacaatatctgcaagtacaaagcacagagtggcaaaaccgcgatctgtaaatgctatgtgaaaaaatgcccgcgcgacggcgccaaatgtgagtttgacagctataaaggtaaatgctattgctactagaggattataaagatgacgacgacaag
BBa_M36623_sequence
1
atgaaattcgtgagcttagcgtccctggggttcgccctcgtggccgccttgggcgcggtggctaccccggttgaagcagattcgctgaccgcgggtgggctggacgcgcgcgatgaatccgcggtactggccacttataatggtaaatgttacaaaaaagacaatatctgcaagtacaaagcacagagtggcaaaaccgcgatctgtaaatgctatgtgaaaaaatgcccgcgcgacggcgccaaatgtgagtttgacagctataaaggtaaatgctattgc
BBa_M36629_sequence
1
gattataaagatgacgacgacaag
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z