BBa_M41004 1 BBa_M41004 AlkS coding sequence in Pseudomonas putida 2013-05-11T11:00:00Z 2015-05-08T01:14:08Z Canosa, I., et al. "A Positive Feedback Mechanism Controls Expression of AlkS, the Transcriptional Regulator of the Pseudomonas Oleovorans Alkane Degradation Pathway." Molecular microbiology 35.4 (2000): 791-9. Van Beilen, JB, et al. "Analysis of Pseudomonas Putida Alkane-Degradation Gene Clusters and Flanking Insertion Sequences: Evolution and Regulation of the Alk Genes." Microbiology 147.6 (2001): 1621-30. This gene encodes a transcription factor AlkS, which activates alkane degradation operon. AlkS self-regulates its expression. In the presence of alkanes, AlkS forms AlkS-hydrocarbon (AlkS-HC) complex which downregulates pAlkS1 and upregulates pAlkS2. AlkS-HC complex activates pAlkB which is responsible for expression of alkane degradation operon. false false _1503_ 0 16820 9 Not in stock false We cannot separate pAlkS1, pAlkS2 and AlkS gene because of self-regulatory system. false Hao Xing BBa_M41004_sequence 1 atgaaaataataataaataatgatttcccggtcgctaaggtcggagcggatcaaattacgactctagtaagtgccaaagttcatagttgcatatatcggccaagattgagtatcgcggatggagccgctcccagagtatgcctttacagagccccacctggatatgggaaaaccgttgctcttgcgttcgagtggctacgccacagaacagccggacgtcctgcagtgtggctttctttaagagccagttcttacagtgaatttgatatctgcgcagagattattgagcagcttgaaactttcgaaatggtaaaattcagccgtgtgagagagggtgtgagcaagcctgcgctcttgcgagaccttgcatctagtctttggcagagcacctcgaataacgagatagaaacgctagtttgtttggataatattaatcatgacttagacttgccgttgttgcacgcacttatggagtttatgttaaatacaccaaaaaatatcaggtttgcagttgcaggcaatacaataaaagggttctcgcagcttaaacttgcaggcgctatgcgggagtacaccgagaaagacttggcctttagcgcagaagaggcggtggcgttagcggaggcagagtctgttcttggagttcctgaagaacagatagagaccttggtgcaagaagttgaggggtggcctgctcttgtagtttttttgttaaagcgtgagttgccggccaagcatatttcagcagtagttgaagtagacaattactttagggatgaaatatttgaggcgattcccgagcgctatcgtgtttttcttgcaaattcttcattgctcgatttcgtgacgcctgatcaatacaattatgtattcaaatgcgtcaatggggtctcatgtattaagtatttaagcactaattacatgttgcttcgccatgtgagcggtgagccagcgcagtttacactgcatccagtactgcgtaattttctacgagaaattacttggactgaaaatcctgctaaaagatcctacctgcttaagcgtgcagctttctggcattggcgtagaggtgaataccagtatgcaatacgaatatccctacgggcgaatgactgtcgctgggcagtcagcatgtctgagagaataattttagatttgtcatttcgtcagggcgaaatagatgcgctgagacagtggctgttagagctgccgaagcaggcctggcaccaaaaacccatagtgcttattagttacgcgtgggtattgtatttcagtcagcaaggcgcgcgagcagagaagttaattaaagacctatcttcacaatccgataaaaaaaataaatggcaagaaaaggaatggctgcagcttgtgcttgcaataggtaaagcaaccaaagatgaaatgctttcgagtgaggagctctgtaataagtggattagtttatttggggattcaaacgcagttggaaaaggggccgcgctaacctgtttggcttttatttttgccagtgagtatagatttgcagagttggagaaggtgctggctcaggcccaagccgtgaataaatttgcaaaacaaaattttgcttttggttggctgtatgtcgcgaggtttcaacaagccctagcaagcggaaaaatgggctgggcgaggcagattataactcaagcacgcacagacagtcgcgcgcagatgatggaatccgagtttacttcgaaaatgtttgacgctctagagcttgagttacattatgaattgcgctgcttggacacctcagaagaaaagctctccaaaattttagagttcatttccaatcacggggtgacagacgtgtttttttccgtatgccgtgctgtgtcagcttggcggcttggaaggagtgacctaaatggctccattgagatattggagtgggcgaaggcgcatgcggttgaaaaaaatctaccaagattggaagttatgagccaaattgagatctatcagcgcttagtctgtcaaggcataacgggcataaataatttaaaaactcttgaagatcataagattttctccggacagcactcagcccccctaaaagcacgcctgctgcttgttcaatcactagtgctttcccgagatcggaactttcatagtgccgcgcacagagcgttattggctattcagcaagcccgtaaaattaacgcgggccagctggaagtccgtggattattgtgtttggccggagcgcaggcaggtgccggtgatttaaaaaaggctcagcttaacattgtttatgcagtggagatagcaaaacagcttcaatgctttcaaacagttcttgatgaagtatgtttaattgagcgaataataccggcttcatgtgaagccttcacagcagttaatttagatcaagcgattggggcttttagtcttccgcgaatagttgagattggaaagtccgcagagaataaagctgacgctttattgacacggaagcagattgctgtcttgaggcttgtaaaagaggggtgctcaaacaaacaaatagcaacaaatatgcatgtcaccgaagatgctataaagtggcatatgaggaaaatatttgccaccttgaatgtagtgaatcgcacgcaagcaacaattgaagctgagcgtcaaggaattatctaaaataatcggcattaagtgatatagtgaaaagtataccggagag igem2sbol 1 iGEM to SBOL conversion Conversion of the iGEM parts registry to SBOL2.1 Chris J. Myers James Alastair McLaughlin 2017-03-06T15:00:00.000Z