BBa_B0034
1
BBa_B0034
RBS (Elowitz 1999) -- defines RBS efficiency
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
RBS based on Elowitz repressilator.
false
true
_1_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS.
Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation23325
1
conserved
range23325
1
5
8
BBa_P101109
1
BBa_P101109
LMS RBS.ORF.Term
2009-06-28T11:00:00Z
2015-05-08T01:14:11Z
Synthesis/Cloning
LMS RBS.ORF.Term
false
false
_11_
0
1380
102
Not in stock
false
None
false
Matt Gethers
component2006938
1
BBa_C100009
component2006941
1
BBa_B0012
component2006937
1
BBa_B0034
component2006939
1
BBa_B0010
annotation2006937
1
BBa_B0034
range2006937
1
1
12
annotation2006938
1
BBa_C100009
range2006938
1
19
1818
annotation2006941
1
BBa_B0012
range2006941
1
1915
1955
annotation2006939
1
BBa_B0010
range2006939
1
1827
1906
BBa_B0010
1
BBa_B0010
T1 from E. coli rrnB
2003-11-19T12:00:00Z
2015-08-31T04:07:20Z
Transcriptional terminator consisting of a 64 bp stem-loop.
false
false
_1_
0
24
7
In stock
false
true
Randy Rettberg
annotation7018
1
BBa_B0010
range7018
1
1
80
annotation4184
1
stem_loop
range4184
1
12
55
BBa_C100009
1
BBa_C100009
ORF of LMS odorant enzyme
2009-06-24T11:00:00Z
2015-08-31T04:07:24Z
Synthesized.
ORF of LMS odorant enzyme
false
false
_11_
0
1380
102
Not in stock
false
Added biobricks prefix and suffix.
false
Matt Gethers
BBa_B0012
1
BBa_B0012
TE from coliphageT7
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Derived from the TE terminator of T7 bacteriophage between Genes 1.3 and 1.4 <genbank>V01146</genbank>.
Released HQ 2013
Transcription terminator for the <i>E.coli</i> RNA polymerase.
false
false
_1_
0
24
7
In stock
false
<P> <P>Suggested by Sri Kosuri and Drew Endy as a high efficiency terminator. The 5' end cutoff was placed immediately after the TAA stop codon and the 3' end cutoff was placed just prior to the RBS of Gene 1.4 (before AAGGAG).<P> Use anywhere transcription should be stopped when the gene of interest is upstream of this terminator.
false
Reshma Shetty
annotation7020
1
BBa_B0012
range7020
1
1
41
annotation1686
1
T7 TE
range1686
1
8
27
annotation1687
1
stop
range1687
1
34
34
annotation1690
1
polya
range1690
1
28
41
BBa_B0010_sequence
1
ccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctc
BBa_C100009_sequence
1
atggcgctgaaagttctgtcagtcgcgacccaaatggcgatcccttctaacctgactacttgccttcagccgagccacttcaagtcttcgccgaaactgctttccagcaccaactcctctagccgtagccgtctgcgtgtgtactgttctagcagccagctgaccaccgaacgtcgtagcggtaactacaacccaagccgttgggatgttaactttatccaatccctgctgtccgactataaggaagacaaacatgtgattcgtgccagtgaactggtgaccctggttaaaatggagctggaaaaagaaaccgatcagatccgtcaactggaactgattgatgacctgcaacgtatgggcttatcggaccacttccagaatgaatttaaagaaatcctgtcttcgatctatttggaccatcattattacaaaaacccgttcccgaaagaggaacgtgatctgtattctacgtccctggctttccgcctgctccgcgagcacggctttcaggtggctcaagaagttttcgactccttcaagaacgaagaaggggagttcaaagaatcgctgagcgatgacacccgcggcttactccagctgtatgaagcgagcttcctgctgaccgaaggcgaaactaccctggaaagcgcacgcgagtttgccaccaaatttctcgaagaaaaagtaaatgaaggcggtgtcgatggagatctgctgacccgcattgcgtattctctggacatcccgctgcactggcgtatcaaacgtccaaacgcgccggtatggattgagtggtatcgtaaacgtccggacatgaacccagtcgttctggagctggcaatcctcgatctgaacatcgttcaggcgcagttccaggaagaactgaaagaatctttccgttggtggcgcaataccggtttcgttgaaaaactgccattcgctcgcgaccgtctggtggagtgctacttctggaacactggaattattgaaccgcgccagcatgcttcagcccgcattatgatgggtaaagttaacgctctgattaccgtaatcgatgacatttacgacgtatacggcaccctggaagaactggaacagtttaccgatctgatccgtcgttgggatatcaactcgatcgatcagctgccggactacatgcagctgtgcttcctggctctcaacaacttcgttgatgacacgtcttatgacgttatgaaggaaaaaggtgtaaacgttatcccgtacctgcgccagagctgggttgatctggcggacaagtatatggtcgaagcacgttggttctacggtggccataaaccgtctctggaagagtatctggagaactcttggcagagcatcagcggcccgtgcatgctcacccacatcttcttccgtgttaccgattctttcaccaaagaaactgtggattcgctgtataaataccacgatctggtccgttggtcttctttcgtgctgcgcctggctgacgacctgggcaccagcgtagaagaagtcagccgtggtgatgtaccgaagtcgctgcaatgttacatgtctgattacaacgcatctgaagcggaagctcgcaaacatgtgaaatggttgatcgctgaggtttggaaaaagatgaacgccgaacgtgtgtccaaagatagcccattcggtaaggactttattggttgcgctgtggacctgggtcgtatggcacagctgatgtaccacaacggtgatggtcacggcacccagcacccgatcatccaccaacagatgacgcgcaccctgtttgaaccgttcgcttaa
BBa_B0034_sequence
1
aaagaggagaaa
BBa_P101109_sequence
1
aaagaggagaaatactagatggcgctgaaagttctgtcagtcgcgacccaaatggcgatcccttctaacctgactacttgccttcagccgagccacttcaagtcttcgccgaaactgctttccagcaccaactcctctagccgtagccgtctgcgtgtgtactgttctagcagccagctgaccaccgaacgtcgtagcggtaactacaacccaagccgttgggatgttaactttatccaatccctgctgtccgactataaggaagacaaacatgtgattcgtgccagtgaactggtgaccctggttaaaatggagctggaaaaagaaaccgatcagatccgtcaactggaactgattgatgacctgcaacgtatgggcttatcggaccacttccagaatgaatttaaagaaatcctgtcttcgatctatttggaccatcattattacaaaaacccgttcccgaaagaggaacgtgatctgtattctacgtccctggctttccgcctgctccgcgagcacggctttcaggtggctcaagaagttttcgactccttcaagaacgaagaaggggagttcaaagaatcgctgagcgatgacacccgcggcttactccagctgtatgaagcgagcttcctgctgaccgaaggcgaaactaccctggaaagcgcacgcgagtttgccaccaaatttctcgaagaaaaagtaaatgaaggcggtgtcgatggagatctgctgacccgcattgcgtattctctggacatcccgctgcactggcgtatcaaacgtccaaacgcgccggtatggattgagtggtatcgtaaacgtccggacatgaacccagtcgttctggagctggcaatcctcgatctgaacatcgttcaggcgcagttccaggaagaactgaaagaatctttccgttggtggcgcaataccggtttcgttgaaaaactgccattcgctcgcgaccgtctggtggagtgctacttctggaacactggaattattgaaccgcgccagcatgcttcagcccgcattatgatgggtaaagttaacgctctgattaccgtaatcgatgacatttacgacgtatacggcaccctggaagaactggaacagtttaccgatctgatccgtcgttgggatatcaactcgatcgatcagctgccggactacatgcagctgtgcttcctggctctcaacaacttcgttgatgacacgtcttatgacgttatgaaggaaaaaggtgtaaacgttatcccgtacctgcgccagagctgggttgatctggcggacaagtatatggtcgaagcacgttggttctacggtggccataaaccgtctctggaagagtatctggagaactcttggcagagcatcagcggcccgtgcatgctcacccacatcttcttccgtgttaccgattctttcaccaaagaaactgtggattcgctgtataaataccacgatctggtccgttggtcttctttcgtgctgcgcctggctgacgacctgggcaccagcgtagaagaagtcagccgtggtgatgtaccgaagtcgctgcaatgttacatgtctgattacaacgcatctgaagcggaagctcgcaaacatgtgaaatggttgatcgctgaggtttggaaaaagatgaacgccgaacgtgtgtccaaagatagcccattcggtaaggactttattggttgcgctgtggacctgggtcgtatggcacagctgatgtaccacaacggtgatggtcacggcacccagcacccgatcatccaccaacagatgacgcgcaccctgtttgaaccgttcgcttaatactagagccaggcatcaaataaaacgaaaggctcagtcgaaagactgggcctttcgttttatctgttgtttgtcggtgaacgctctctactagagtcacactggctcaccttcgggtgggcctttctgcgtttata
BBa_B0012_sequence
1
tcacactggctcaccttcgggtgggcctttctgcgtttata
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
James Alastair McLaughlin
Chris J. Myers
2017-03-06T15:00:00.000Z