BBa_S04385
1
BBa_S04385
S04384:C0077
2009-12-07T12:00:00Z
2015-05-08T01:14:39Z
false
false
_9_
0
3663
9
Not in stock
false
false
Eniak Hernandez
component2246998
1
BBa_S04384
component2247002
1
BBa_C0077
annotation2246998
1
BBa_S04384
range2246998
1
1
146
annotation2247002
1
BBa_C0077
range2247002
1
153
939
BBa_S04384
1
BBa_S04384
K091146:B0034
2009-12-07T12:00:00Z
2015-05-08T01:14:39Z
false
true
_9_
0
3663
9
Not in stock
false
false
Eniak Hernandez
component2063899
1
BBa_B0034
component2063897
1
BBa_K091146
annotation2063899
1
BBa_B0034
range2063899
1
135
146
annotation2063897
1
BBa_K091146
range2063897
1
1
126
BBa_C0077
1
cinr
cinR activator from Rhizobium leguminosarum (+LVA)
2004-01-27T12:00:00Z
2015-08-31T04:07:24Z
Rhizobium leguminosarum
Released HQ 2013
In complex with O3-C14:1-HSL (made by BBa_C0076), CinR binds to the Cin promoter (BBa_R0077) and activates transcription.
false
false
_1_
0
24
7
In stock
false
The regulatory locus cinRI in Rhizobium leguminosarum conrols a network of quorum-sensing loci
Lithgow, JK; Wilkinson, A; Hardman, A; Rodelas, B; Wisniewski-Dye, F; Williams, P; Downie, AJ
MOL. MICROBIOLOGY 37(1): 81-97, 2000
<P>Change log: original STOP: tag -> taATAA
true
crackdots
annotation301112
1
cinR
range301112
1
1
723
annotation306600
1
LVA
range306600
1
724
756
annotation2214000
1
Help:Barcodes
range2214000
1
763
787
BBa_K091146
1
BBa_K091146
pLas/Lux Hybrid Promoter
2008-07-16T11:00:00Z
2015-05-08T01:08:38Z
The LuxR binding site is from BBa_R0062 and the pLas' promoter is from the region upstream of the LasI gene in Pseudomonas aeruginosa.
Released HQ 2013
K091146 is a modified version of the pLas' promoter (BBa_K091117) containing the addition of a luxR binding site between the -35 and -10 regions. This promoter is expected to be activated in the presence of PAI-1 and LasR and repressed in the presence of AI-1 and LuxR.
false
false
_191_
0
3067
9
In stock
true
The Lux box was placed adjacent to the LasR binding site with the aim of minimizing cross-talk in the presence of both PAI-1 and AI-1; since the LasR site should have a higher affinity, we hope that the binding of PAI-1 will competitively exclude the binding of AI-1.
true
Erin Feeney
annotation1967355
1
LuxR
range1967355
1
94
113
annotation1967358
1
Transcriptional Start
range1967358
1
125
125
annotation1967357
1
-35
range1967357
1
86
91
annotation1967356
1
-10
range1967356
1
113
118
annotation1967354
1
LasR
range1967354
1
75
93
BBa_B0034
1
BBa_B0034
RBS (Elowitz 1999) -- defines RBS efficiency
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
RBS based on Elowitz repressilator.
false
true
_1_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS.
Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation23325
1
conserved
range23325
1
5
8
BBa_S04385_sequence
1
tgttctcgtgtgaagccattgctctgatcttttggacgtttcttcgagcctagcaagggtccgggttcaccgaaatctatctcatttgctagtacctgtaggatcgtacaggtataaattcttcagtactagagaaagaggagaaatactagatgattgagaatacctatagcgaaaagttcgagtccgcgttcgaacagatcaaggcggcggccaacgtggatgccgccatccgtattctccaggcggaatataacctcgatttcgtcacctaccatctcgcccagacgatcgcgagcaagatcgattcgcccttcgtgcgcaccacctatccggatgcctgggtttcccgctacctcctcaacagctatgtgaaggtcgatccgatcgtcaagcagggcttcgaacgccagctgcccttcgactggagcgaggtcgaaccgacgccggaggcctatgccatgctggtcgacgcccagaaacacggcatcggtggcaatggctactccatccccgtcgccgacaaggcgcagcgccgcgccctgctgtcgctgaatgcccgtataccggccgacgaatggaccgagctcgtgcgccgctgccgcaacgagtggatcgagatcgcccatctgatccaccgcaaggccgtctatgagctgcatggcgaaaacgatccggtgccggcattgtcgccgcgcgagatcgagtgtctgcactggaccgccctcggcaaggattacaaggatatttcggtcatcctgggcatatcagagcataccacacgcgattacctgaagaccgcccgcttcaagctcggctgcgccacgatctcggccgccgcgtcgcgggctgttcaattgcgcatcatcaatcccgctgcaaacgacgaaaactacgctttagtagcttaataacgctgatagtgctagtgtagatcgc
BBa_B0034_sequence
1
aaagaggagaaa
BBa_C0077_sequence
1
atgattgagaatacctatagcgaaaagttcgagtccgcgttcgaacagatcaaggcggcggccaacgtggatgccgccatccgtattctccaggcggaatataacctcgatttcgtcacctaccatctcgcccagacgatcgcgagcaagatcgattcgcccttcgtgcgcaccacctatccggatgcctgggtttcccgctacctcctcaacagctatgtgaaggtcgatccgatcgtcaagcagggcttcgaacgccagctgcccttcgactggagcgaggtcgaaccgacgccggaggcctatgccatgctggtcgacgcccagaaacacggcatcggtggcaatggctactccatccccgtcgccgacaaggcgcagcgccgcgccctgctgtcgctgaatgcccgtataccggccgacgaatggaccgagctcgtgcgccgctgccgcaacgagtggatcgagatcgcccatctgatccaccgcaaggccgtctatgagctgcatggcgaaaacgatccggtgccggcattgtcgccgcgcgagatcgagtgtctgcactggaccgccctcggcaaggattacaaggatatttcggtcatcctgggcatatcagagcataccacacgcgattacctgaagaccgcccgcttcaagctcggctgcgccacgatctcggccgccgcgtcgcgggctgttcaattgcgcatcatcaatcccgctgcaaacgacgaaaactacgctttagtagcttaataacgctgatagtgctagtgtagatcgc
BBa_K091146_sequence
1
tgttctcgtgtgaagccattgctctgatcttttggacgtttcttcgagcctagcaagggtccgggttcaccgaaatctatctcatttgctagtacctgtaggatcgtacaggtataaattcttcag
BBa_S04384_sequence
1
tgttctcgtgtgaagccattgctctgatcttttggacgtttcttcgagcctagcaagggtccgggttcaccgaaatctatctcatttgctagtacctgtaggatcgtacaggtataaattcttcagtactagagaaagaggagaaa
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z