BBa_K748003
1
BBa_K748003
yddV is a Diguanylate Cyclase-Genomic.
2012-09-14T11:00:00Z
2015-05-08T01:13:12Z
de novo synthesis
Released HQ 2013
yddV is a Diguanylate Cyclase-Genomic. The product of gene yddV has diguanylate cyclase (DGC) activity. DGC uses 2 GTP to form a Bis-(3???-5???)-cyclic dimeric guanosine monophosphate (c-di-GMP). C-di-GMP is a global second messenger in bacteria. Biofilm formation of E.coli is manipulable by varying c-di-GMP concentrations. When the c-di-GMP level stays low, there is little biofilm and the bacteria is dispersive. High concentrations of c-di-GMP promote bacteria to form more cellulose and fimbriae, which enhances the biofilm formation and decrease the motility of bacteria.
false
false
_999_
0
8564
9
In stock
false
nothing special
false
Lei Qiao
BBa_B0034
1
BBa_B0034
RBS (Elowitz 1999) -- defines RBS efficiency
2003-01-31T12:00:00Z
2015-08-31T04:07:20Z
Released HQ 2013
RBS based on Elowitz repressilator.
false
true
_1_
0
24
7
In stock
false
Varies from -6 to +1 region from original sequence to accomodate BioBricks suffix. <p>No secondary structures are formed in the given RBS region. Users should check for secondary structures induced in the RBS by upstream and downstream elements in the +50 to -50 region, as such structures will greatly affect the strength of the RBS.
Contact info for this part: <a href="mailto:(bchow@media.mit.edu)">Brian Chow</a>
true
Vinay S Mahajan, Voichita D. Marinescu, Brian Chow, Alexander D Wissner-Gross and Peter Carr IAP, 2003.
annotation23325
1
conserved
range23325
1
5
8
BBa_S05051
1
BBa_S05051
B0034:K748003
2012-09-14T11:00:00Z
2015-05-08T01:14:49Z
Released HQ 2013
false
false
_9_
0
8564
9
In stock
false
false
Lei Qiao
component2183421
1
BBa_B0034
component2183422
1
BBa_K748003
annotation2183422
1
BBa_K748003
range2183422
1
19
1404
annotation2183421
1
BBa_B0034
range2183421
1
1
12
BBa_B0034_sequence
1
aaagaggagaaa
BBa_K748003_sequence
1
atggaaatgtattttaaacgtatgaaagatgaatggaccggtctggttgaacaagcagatcctccaattagagctaaagctgctgagatagcggtggctcacgctcactacttgagtatagagttttacagaatcgtacgaatcgatcctcacgctgaggagttcttgagtaacgaacaggtagagagacagttgaagagtgctatggagagatggataataaatgtactttctgcccaggtagacgacgtagaaagacttatacagatacagcacactgtagctgaagttcatgctagaataggaatacctgtagaaatagtagagatgggtttcagagtgcttaaaaagatattgtaccctgtaattttcagtagtgactacagtgctgctgagaagttgcaagtatatcacttttcaataaatagtatagacatagctatggaagtaatgactagagctttcactttctctgacagtagtgcttctaaagaggatgagaattacagaatattcagtcttcttgaaaacgctgaagaggaaaaagagagacaaatagcttctatattgagttgggaaattgacataatatacaagatacttcttgattctgatttgggcagtagtttgcctttgtctcaggctgacttcggcctttggttcaaccacaagggacgacactacttcagcggaatagctgaggtaggccatatatctcgacttatacaggatttcgatggaattttcaatcagacgatgagaaatacgagaaacttgaacaaccgttcattgagagtaaaattcttgcttcagataagaaacactgtgagccagataataactcttctacgagagttgttcgaggaggttagtcgacacgaggtaggcatggatgtgcttacgaaattgctaaacagacgattcttgccgaccatcttcaagagagagatagcgcacgctaaccgaactggcacgcctctttcggtattgatcatagatgtagataagttcaaagagataaatgacacatggggacataatactggtgatgaaatattgagaaaggtaagtcaagctttttacgataacgtacgaagttctgattacgttttcagatacggaggcgacgagttcataatagtgctaacggaagcttctgagaacgagacgcttcgaacggctgaaagaatacgtagtcgagtagaaaaaactaagttgaaggctgctaacggagaggatatagctttgagtctatctataggagctgctatgtttaacggacacccagattacgagcgacttatacagatagcggatgaggcactttacatagctaagagaagaggaagaaacagagtagagttgtggaaagctagtttgtaataa
BBa_S05051_sequence
1
aaagaggagaaatactagatggaaatgtattttaaacgtatgaaagatgaatggaccggtctggttgaacaagcagatcctccaattagagctaaagctgctgagatagcggtggctcacgctcactacttgagtatagagttttacagaatcgtacgaatcgatcctcacgctgaggagttcttgagtaacgaacaggtagagagacagttgaagagtgctatggagagatggataataaatgtactttctgcccaggtagacgacgtagaaagacttatacagatacagcacactgtagctgaagttcatgctagaataggaatacctgtagaaatagtagagatgggtttcagagtgcttaaaaagatattgtaccctgtaattttcagtagtgactacagtgctgctgagaagttgcaagtatatcacttttcaataaatagtatagacatagctatggaagtaatgactagagctttcactttctctgacagtagtgcttctaaagaggatgagaattacagaatattcagtcttcttgaaaacgctgaagaggaaaaagagagacaaatagcttctatattgagttgggaaattgacataatatacaagatacttcttgattctgatttgggcagtagtttgcctttgtctcaggctgacttcggcctttggttcaaccacaagggacgacactacttcagcggaatagctgaggtaggccatatatctcgacttatacaggatttcgatggaattttcaatcagacgatgagaaatacgagaaacttgaacaaccgttcattgagagtaaaattcttgcttcagataagaaacactgtgagccagataataactcttctacgagagttgttcgaggaggttagtcgacacgaggtaggcatggatgtgcttacgaaattgctaaacagacgattcttgccgaccatcttcaagagagagatagcgcacgctaaccgaactggcacgcctctttcggtattgatcatagatgtagataagttcaaagagataaatgacacatggggacataatactggtgatgaaatattgagaaaggtaagtcaagctttttacgataacgtacgaagttctgattacgttttcagatacggaggcgacgagttcataatagtgctaacggaagcttctgagaacgagacgcttcgaacggctgaaagaatacgtagtcgagtagaaaaaactaagttgaaggctgctaacggagaggatatagctttgagtctatctataggagctgctatgtttaacggacacccagattacgagcgacttatacagatagcggatgaggcactttacatagctaagagaagaggaagaaacagagtagagttgtggaaagctagtttgtaataa
igem2sbol
1
iGEM to SBOL conversion
Conversion of the iGEM parts registry to SBOL2.1
Chris J. Myers
James Alastair McLaughlin
2017-03-06T15:00:00.000Z