iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J23008BBa_J23008 Version 1 (Component)[key3c] riboregulator for lock3 variants
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J23009BBa_J23009 Version 1 (Component)[key3d] riboregulator for lock3 variants
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
Lock 1BBa_J01010 Version 1 (Component)Riboregulator Lock 1
BBa_J23007BBa_J23007 Version 1 (Component)[key3b] riboregulator for lock3 variants
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
FurBO_11498 Version 1 (Component) hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_J23032BBa_J23032 Version 1 (Component)[lock3d]
Key 1BBa_J01008 Version 1 (Component)Riboregulator key 1
Lock3BBa_J01080 Version 1 (Component)Lock3
Lock 2BBa_J01011 Version 1 (Component)Riboregulator Lock 2
Key3BBa_J01086 Version 1 (Component)Key3
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_J23059BBa_J23059 Version 1 (Component)[key3e] key3d-like riboregulator with longer spacers
BBa_K1087004BBa_K1087004 Version 1 (Component)Ptet-Riboregulator(lock 3d)
BBa_J23060BBa_J23060 Version 1 (Component)[key3f] key3d variant with shorter linkers
BBa_I714033BBa_I714033 Version 1 (Component)crRNA-lock3-var1 (A new "lock" designed by our team)
BBa_J23078BBa_J23078 Version 1 (Component)[lock3i]
BBa_J23044BBa_J23044 Version 1 (Component)[key3d][key3c]
BBa_J23043BBa_J23043 Version 1 (Component)[key3c][key3d]
BBa_J23066BBa_J23066 Version 1 (Component)[key3c][key3d][B0015]
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
BBa_K2041012BBa_K2041012 Version 1 (Component)key3d-RBS-ptet-lock3
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_J23086BBa_J23086 Version 1 (Component)[key3c][key3d][TT][oriTr]
Key 2BBa_J01009 Version 1 (Component)Riboregulator Key 2
scarBBa_G0000 Version 1 (Component)SpeI/XbaI scar for RBS-CDS junctions
loxBBa_J61046 Version 1 (Component)[Lox] site for recombination
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_K2041014BBa_K2041014 Version 1 (Component)key3d-RBS-ptet-lock3-fimE-T
BBa_J23031BBa_J23031 Version 1 (Component)[lock3c]
BBa_K2041015BBa_K2041015 Version 1 (Component)ptet-key3d-RBS-ptet-lock3-fimE-T
mCherryBBa_J06505 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_K2041013BBa_K2041013 Version 1 (Component)ptet-key3d-RBS-ptet-lock3-RBS-GFP-T
RBS-spoVGBBa_K143021 Version 1 (Component)SpoVG ribosome binding site (RBS) for B. subtilis
BBa_J01142BBa_J01142 Version 1 (Component)[pLacI pL][key3]
[pTET][locBBa_J01060 Version 1 (Component)OnLock1 = [pTet][Lock1]
Lock4BBa_J01081 Version 1 (Component)Lock4