CnU6
CnU6_terminator Version 1 (Unknown)
Organism: Cryptococcus neoformans var. neoformans JEC21

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

iGEM to SBOL conversion
igem2sbol Version 1 (Activity)
Conversion of the iGEM parts registry to SBOL2.1

SyBiOntKB to SBOL conversion
SyBiOntKB2sbol Version 1 (Activity)
Conversion of the Synthetic Biology Ontology knowledge base to SBOL 2.1

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

Direct Sequence Pull
direct Version 1 (Activity)
Used to indicate that a sequence was pulled directly from a source with no alterations made

BBa_B0010
BBa_B0010 Version 1 (Component)
T1 from E. coli rrnB

Sequence Cut Out of Plasmid
cut_out_of_plasmid Version 1 (Activity)
Used to indicate that a sequence was cut out of the plasmid referenced as the source

Reverse Orientation Sequence Pull
reverse_orientation Version 1 (Activity)
Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_B0015
BBa_B0015 Version 1 (Component)
double terminator (B0010-B0012)

Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown

Sequence Pull with Mutations
mutations Version 1 (Activity)
Used to indicate that a sequence had mutations added after pulling from the source and before submission

Composite Sequence Pull
Composite Version 1 (Activity)
When multiple sources where combined to make a new part.

BBa_B0011
BBa_B0011 Version 1 (Component)
LuxICDABEG (+/-)

Codon Optimised Sequence Pull
codon_optimisation Version 1 (Activity)
Used to indicate that a sequence was codon optimised after pulling from the source and before submission

BBa_B1001
BBa_B1001 Version 1 (Component)
Terminator (artifical, small, %T~=90)

BBa_B0014
BBa_B0014 Version 1 (Component)
double terminator (B0012-B0011)

mRFP1
BBa_J04650 Version 1 (Component)
E1010.B0015

BBa_B0025
BBa_B0025 Version 1 (Component)
double terminator (B0015), reversed

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_B1006
BBa_B1006 Version 1 (Component)
Terminator (artificial, large, %T~>90)

BBa_J24675
BBa_J24675 Version 1 (Component)
PoPS-> lacI and mCherry

GFP.Term
BBa_J04630 Version 1 (Component)
E0040.B0015

BBa_J24679
BBa_J24679 Version 1 (Component)
RBS + LacI

BBa_J24696
BBa_J24696 Version 1 (Component)
18. pTetR - BBa_C0080

BBa_B0016
BBa_B0016 Version 1 (Component)
Terminator (T7 RNAP specific, T_Phi)

BBa_J24691
BBa_J24691 Version 1 (Component)
13. pLacI - BBa_J24680

BBa_J24694
BBa_J24694 Version 1 (Component)
16. pTetR - BBa_J24680

BBa_J24697
BBa_J24697 Version 1 (Component)
19. pBAD - BBa_J24683

BBa_J24699
BBa_J24699 Version 1 (Component)
21. BBa_I0500 - BBa_J24685

BBa_J24698
BBa_J24698 Version 1 (Component)
20. BBa_I0500 - BBa_J24684

BBa_J24693
BBa_J24693 Version 1 (Component)
15. pLacI - BBa_J24689

BBa_J24695
BBa_J24695 Version 1 (Component)
17. pTetR - BBa_J24681

BBa_J24692
BBa_J24692 Version 1 (Component)
14. pLacI - BBa_J24681

BBa_J24676
BBa_J24676 Version 1 (Component)
pBAD to tetR coding region, lacI coding region, and mCherry reporter

BBa_J24710
BBa_J24710 Version 1 (Component)
30. S RBS - TetR - S RBS - ECFP (+LVA) - terminator

BBa_J24709
BBa_J24709 Version 1 (Component)
29. M RBS - TetR - S RBS - ECFP (+LVA) - terminator

BBa_M36010
BBa_M36010 Version 1 (Component)
Transcription Terminator (Strong)

BBa_J24704
BBa_J24704 Version 1 (Component)
24. BBa_J24690 to terminator

Truncated Sequence Pull
Truncated Version 1 (Activity)
Used to indicate that a sequence was truncated after pulling from the source and before submission

BBa_J24720
BBa_J24720 Version 1 (Component)
40. 15(BBa_J24693)==25(BBa_J24705)

BBa_J24730
BBa_J24730 Version 1 (Component)
50. 18(BBa_J24696)==32(BBa_J24712)