Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown

lux pR
BBa_R0062 Version 1 (Component)
Promoter (luxR & HSL regulated -- lux pR)

BBa_J04450
BBa_J04450 Version 1 (Component)
RFP Coding Device

tetR
BBa_C0040 Version 1 (Component)
tetracycline repressor from transposon Tn10 (+LVA)

BBa_F2620
BBa_F2620 Version 1 (Component)
3OC₆HSL -> PoPS Receiver

cI lam
BBa_C0051 Version 1 (Component)
cI repressor from E. coli phage lambda (+LVA)

Amp Cas
BBa_I13800 Version 1 (Component)
Ampicillin Resistance Cassette

cI lam
BBa_R0051 Version 1 (Component)
promoter (lambda cI regulated)

BBa_F1610
BBa_F1610 Version 1 (Component)
3OC₆HSL Sender Device

RhlR+C4
BBa_R0071 Version 1 (Component)
Promoter (RhlR & C4-HSL regulated)

BBa_F2622
BBa_F2622 Version 1 (Component)
3OC₆HSL Receiver Device

eyfp
BBa_E0030 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

lux pL
BBa_R0063 Version 1 (Component)
Promoter (luxR & HSL regulated -- lux pL)<br>

rhII
BBa_C0070 Version 1 (Component)
autoinducer synthetase for N-butyryl-HSL (BHL) and HHL

luxI
BBa_C0061 Version 1 (Component)
autoinducer synthetase for AHL

BBa_F2621
BBa_F2621 Version 1 (Component)
3OC₆HSL Receiver Device

BBa_K2033006
BBa_K2033006 Version 1 (Component)
3OH-7-cis-C14-HSL Sender Device-CerI

cI+luxR
BBa_R0065 Version 1 (Component)
Promoter (lambda cI and luxR regulated -- hybrid)

ecfp
BBa_E0020 Version 1 (Component)
engineered cyan fluorescent protein derived from A. victoria GFP

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

cII p22
BBa_R0053 Version 1 (Component)
Promoter (p22 cII regulated)

BBa_J09855
BBa_J09855 Version 1 (Component)
Constitutive luxR device with pLuxR

CD4 signal
BBa_I712009 Version 1 (Component)
CD4 signal peptide; localizes to plasma membrane

cI 434
BBa_C0052 Version 1 (Component)
cI repressor from phage 434 (+LVA)

cinR
BBa_R0078 Version 1 (Component)
Promoter (cinR and HSL regulated)

BBa_K1670000
BBa_K1670000 Version 1 (Component)
CepI C8-HSL-sender device

BBa_F1760
BBa_F1760 Version 1 (Component)
3OC₁₄HSL Sender Device

BBa_K204032
BBa_K204032 Version 1 (Component)
3OH,C14 : 1-HSL receiver

BBa_I13202
BBa_I13202 Version 1 (Component)
3OC₆HSL Sender Controlled by Lac Repressible Promoter

cinR
BBa_R0077 Version 1 (Component)
Promoter (cinR and HSL regulated, RBS+)

aiiA
BBa_C0060 Version 1 (Component)
autoinducer inactivation enzyme from Bacillus; hydrolyzes acetyl homoserine lactone

BBa_K204025
BBa_K204025 Version 1 (Component)
3OH,C14 : 1-HSL generater

lacZ-alpha
BBa_I732006 Version 1 (Component)
lacZ alpha fragment

cI 434
BBa_R0052 Version 1 (Component)
Promoter (434 cI regulated)

BBa_F1611
BBa_F1611 Version 1 (Component)
3OC₆HSL Sender Device

BBa_K300009
BBa_K300009 Version 1 (Component)
PoPS->3OC6HSL sender device

lux pR
BBa_R1062 Version 1 (Component)
Promoter, Standard (luxR and HSL regulated -- lux pR)<br>

BBa_F2770
BBa_F2770 Version 1 (Component)
3OC₁₄HSL Receiver Device

cI lam
BBa_R1051 Version 1 (Component)
Promoter, Standard (lambda cI regulated)<br>

CII
BBa_K116602 Version 1 (Component)
CII coding region from &#955; phage

Las CIO
BBa_I14016 Version 1 (Component)
P(Las) CIO

BBa_I719021
BBa_I719021 Version 1 (Component)
Constitutive 3OC₆HSL Sender Device

His-Stop
BBa_K133133 Version 1 (Component)
His affinity tag-stop

cI HK022
BBa_C0050 Version 1 (Component)
cI repressor from phage HK022 (+LVA?)