SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

BBa_B0033
BBa_B0033 Version 1 (Component)
RBS.4 (weaker) -- derivative of BBa_0030

BBa_K2066018
BBa_K2066018 Version 1 (Component)
UNS 2 Sequence, from Torella et al., 2013

BBa_K2013019
BBa_K2013019 Version 1 (Component)
4-hydroxy-2-ketovalerate aldolase

MSA
BBa_K1392932 Version 1 (Component)
4-hydroxy-2-ketovalerate aldolase

BBa_J52008
BBa_J52008 Version 1 (Component)
luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)

BBa_K1088004
BBa_K1088004 Version 1 (Component)
IspG (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase)

folB
BBa_K137009 Version 1 (Component)
folB (dihydroneopterin aldolase)

BBa_I725011
BBa_I725011 Version 1 (Component)
B-hydroxy butyryl coA dehydrogenase

CirCir
BBa_K1392930 Version 1 (Component)
2-hydroxy-6-oxohepta-2,4-dienoate hydrolase

SYFP2
BBa_K864100 Version 1 (Component)
Super Yellow Fluorescent Protein 2 (SYFP2)

BBa_K1114107
BBa_K1114107 Version 1 (Component)
Bicistronic Design RBS 2, MoClo Format with BC fusion sites

BBa_K1497010
BBa_K1497010 Version 1 (Component)
Dihydroflavonol 4-reductase (DFR)

GRE3
BBa_K1602004 Version 1 (Component)
Aldose reductase (GRE3) from Saccharomyces cerevisiae S288c

HMG-CoA-R
BBa_K849000 Version 1 (Component)
3-Hydroxy-3-Methyl-Glutaryl-CoA-Reductase from Yeast

BBa_K117002
BBa_K117002 Version 1 (Component)
LsrA promoter (indirectly activated by AI-2)

BBa_J202003
BBa_J202003 Version 1 (Component)
PBAD Mutant#4

circircido
BBa_K1392931 Version 1 (Component)
2-oxopent-4-enoate hydratase

BBa_K2013017
BBa_K2013017 Version 1 (Component)
2-oxopent-4-enoate hydratase

BBa_K2013018
BBa_K2013018 Version 1 (Component)
2-oxopent-4-enoate hydratase

BBa_K1763442
BBa_K1763442 Version 1 (Component)
MaSp1/2[1:2]-12(1C3)

BBa_K1763438
BBa_K1763438 Version 1 (Component)
MaSp1/2[2:1]-12(1C3)

BBa_K078009
BBa_K078009 Version 1 (Component)
bphD codes 2-hydroxy-6-oxo-6-phenylhexa-2,4- dienoate hydrolase

BBa_J100044
BBa_J100044 Version 1 (Component)
LuxI with 4 clause 2-SAT problem

Lac
BBa_K500003 Version 1 (Component)
lignin degradation 4

BBa_K1486020
BBa_K1486020 Version 1 (Component)
rLuc[2]

BBa_K517005
BBa_K517005 Version 1 (Component)
erg20-2

BBa_I742011
BBa_I742011 Version 1 (Component)
ech (feruloyl hydratase/aldolase; vanillin biosynthesis)

BBa_K801093
BBa_K801093 Version 1 (Component)
4-coumarate--coenzyme A ligase (4CL) coding region

BBa_I13515
BBa_I13515 Version 1 (Component)
Screening Plasmid 4

BBa_K079019
BBa_K079019 Version 1 (Component)
Lac 2 - operator library member

BBa_K1940011
BBa_K1940011 Version 1 (Component)
microRNA-34c detector 2.0-2-4

ssrA(DAS+4
BBa_K1075020 Version 1 (Component)
E. coli ssrA(DAS+4)

BBa_K1150042
BBa_K1150042 Version 1 (Component)
uniCAS RNaimer to Bla Target 4

BBa_J07012
BBa_J07012 Version 1 (Component)
scFv anti-fluorescein [4-4-20]

BBa_K1129002
BBa_K1129002 Version 1 (Component)
Enoyl-CoA hydratase/aldolase (ECH) from Pseudomonas putida

BBa_K2066020
BBa_K2066020 Version 1 (Component)
UNS 4 Sequence, from Torella et al., 2013

BBa_K1763439
BBa_K1763439 Version 1 (Component)
MaSp1/2[2:1]-12(T7)

BBa_K1763443
BBa_K1763443 Version 1 (Component)
MaSp1/2[1:2]-12(T7)

BBa_I742012
BBa_I742012 Version 1 (Component)
rbs + ech (feruloyl hydratase/aldolase)

BBa_K1486007
BBa_K1486007 Version 1 (Component)
IFP[2]

BBa_K1150046
BBa_K1150046 Version 1 (Component)
uniCAS RNaimer multiple targets to Bla target 2, 3, 4 and VEGF 4

"Eye 2"
BBa_K1080011 Version 1 (Component)
ChlI2

BBa_K1351031
BBa_K1351031 Version 1 (Component)
LMU Bacillus RBS collection 4

BBa_K1799000
BBa_K1799000 Version 1 (Component)
pLsrA-2

2/3Gly
BBa_K1362467 Version 1 (Component)
other 2/3Gly

BBa_K1150045
BBa_K1150045 Version 1 (Component)
uniCAS RNaimer multiple targets to VEGF 4 and bla target 2