ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SEGA021SEGA021 Version 1 (Component)natural linear DNA.
SEGA022SEGA022 Version 1 (Component)natural linear DNA.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
linkerBBa_K133132 Version 1 (Component)8 aa protein domain linker
BBa_K1321340BBa_K1321340 Version 1 (Component)Double CBD (dCBD) with N-terminal linker
BBa_K1462502BBa_K1462502 Version 1 (Component)PDZ domain + Linker
5xGSBBa_J18922 Version 1 (Component)10aa [GS]x linker
BBa_K1462503BBa_K1462503 Version 1 (Component)SH3 domain + Linker
BBa_K1462501BBa_K1462501 Version 1 (Component)GBD domian + Linker
BBa_K1321339BBa_K1321339 Version 1 (Component)CBDcenA+Linker, RFC 25 standard
BBa_K323107BBa_K323107 Version 1 (Component)PBSII zinc finger + linker
linkerBBa_K157009 Version 1 (Component)Split fluorophore linker; Freiburg standard
3xGSBBa_J18921 Version 1 (Component)6aa [GS]x linker
BBa_K105012BBa_K105012 Version 1 (Component)10 aa flexible protein domain linker
BBa_K323105BBa_K323105 Version 1 (Component)Zif268 zinc finger + linker
BBa_K1486004BBa_K1486004 Version 1 (Component)flexible linker 2x (GGGGS)
linkerBBa_K365005 Version 1 (Component)20 aa linker RFC-25 (fusion standard Freiburg)
BBa_J52026BBa_J52026 Version 1 (Component)dnMyD88-linker-GFP
OmpABBa_K103006 Version 1 (Component)OmpA outer membrane protein A fused to linker; displays proteins on cell surface
BBa_K323108BBa_K323108 Version 1 (Component)Jazz zinc finger + linker
AG4BBa_M10023 Version 1 (Component){˂AG4˃} Silver binding peptide
BBa_K323109BBa_K323109 Version 1 (Component)Blues zinc finger + linker
BBa_K364167BBa_K364167 Version 1 (Component)Zn Finger Linker segment
BBa_K1471005BBa_K1471005 Version 1 (Component)AGS (Linker) - VP16 (Activation domain).
BBa_J52012BBa_J52012 Version 1 (Component)Rluc-linker-PEST191
ShortLinkeBBa_K243004 Version 1 (Component)Short Linker (Gly-Gly-Ser-Gly)
1xGSBBa_J18920 Version 1 (Component)2aa GS linker
BBa_J52021BBa_J52021 Version 1 (Component)dnTraf6-linker-GFP
BBa_K1582033BBa_K1582033 Version 1 (Component)Linker+inJanus
BBa_K1321090BBa_K1321090 Version 1 (Component)Phytochelatin (PC) EC20 + Linker-dCBD
BBa_K864444BBa_K864444 Version 1 (Component)RFP-Linker-SYFP2
LinkerBBa_K1088051 Version 1 (Component)10 aa linker with BamHI restriction site and TEV recognition site
BBa_J52011BBa_J52011 Version 1 (Component)dnMyD88-linker-Rluc
BBa_K1582035BBa_K1582035 Version 1 (Component)Linker+inJanus-m
aes-SH3ligBBa_K1602034 Version 1 (Component)aes-SH3lig
BBa_K1692026BBa_K1692026 Version 1 (Component)aeBLUE - GS linker
linkerBBa_K157013 Version 1 (Component)15 aa flexible glycine-serine protein domain linker; Freiburg standard
BBa_K633001BBa_K633001 Version 1 (Component)Linker + EstA Membrane Protein
BBa_K323106BBa_K323106 Version 1 (Component)Tyr456 zinc finger + linker
BBa_K1582036BBa_K1582036 Version 1 (Component)Linker+sJanus-m
CBDcipABBa_K1615111 Version 1 (Component)CBDcipA with N and C-terminal linker in RFC25
BBa_K1321014BBa_K1321014 Version 1 (Component)CBDCipA with N and C-terminal linker