Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

pBad/araC
BBa_I0500 Version 1 (Component)
Inducible pBad/araC promoter

Reverse Orientation Sequence Pull
reverse_orientation Version 1 (Activity)
Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission

Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown

Sequence Pull with Mutations
mutations Version 1 (Activity)
Used to indicate that a sequence had mutations added after pulling from the source and before submission

BBa_I13453
BBa_I13453 Version 1 (Component)
Pbad promoter

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

pBAD
BBa_K206000 Version 1 (Component)
pBAD strong

Codon Optimised Sequence Pull
codon_optimisation Version 1 (Activity)
Used to indicate that a sequence was codon optimised after pulling from the source and before submission

araC
BBa_C0080 Version 1 (Component)
araC arabinose operon regulatory protein (repressor/activator) from E. coli (+LVA)

AraC
BBa_R0080 Version 1 (Component)
Promoter (AraC regulated)

Ara
BBa_K808000 Version 1 (Component)
araC-Pbad - Arabinose inducible regulatory promoter/repressor unit

BBa_K228009
BBa_K228009 Version 1 (Component)
AraC protein(reversed sequence) and Pbad promoter

BBa_K607040
BBa_K607040 Version 1 (Component)
reverse pBad/araC promoter

pT7
BBa_K525998 Version 1 (Component)
Promoter T7 and RBS

cI+luxR
BBa_R0065 Version 1 (Component)
Promoter (lambda cI and luxR regulated -- hybrid)

Truncated Sequence Pull
Truncated Version 1 (Activity)
Used to indicate that a sequence was truncated after pulling from the source and before submission

BBa_K731201
BBa_K731201 Version 1 (Component)
Arabinose inducible araC-pBAD promoter

BBa_I718008
BBa_I718008 Version 1 (Component)
araC-pBad-rbs-cre

BBa_K228012
BBa_K228012 Version 1 (Component)
AraC-Pbad-SupD

BBa_K1321333
BBa_K1321333 Version 1 (Component)
pSB-AraC-pBAD

AraC O2
BBa_R0081 Version 1 (Component)
Inhibitor (AraC loop attachment with O2 site)

BBa_K228005
BBa_K228005 Version 1 (Component)
AraC protein and Pbad promoter

AID_pBAD
BBa_K103002 Version 1 (Component)
AID under pBAD/araC

BBa_J44002
BBa_J44002 Version 1 (Component)
pBAD reverse

BBa_K1333315
BBa_K1333315 Version 1 (Component)
pBAD with araC

BBa_K577881
BBa_K577881 Version 1 (Component)
pC+AraC+pBad+GFPc

BBa_K1230007
BBa_K1230007 Version 1 (Component)
araC-pBad-rbs-LL37

BBa_K206001
BBa_K206001 Version 1 (Component)
pBAD weak

BBa_K577882
BBa_K577882 Version 1 (Component)
pC+AraC+pBad+RFPc

BBa_K1604022
BBa_K1604022 Version 1 (Component)
araC-pBAD + β-carotene + J23100 + blh

araC
BBa_K1088005 Version 1 (Component)
arabinose regulator (araC) coding sequence

BBa_I746309
BBa_I746309 Version 1 (Component)
phiR73 delta under control of pBAD/araC promoter

BBa_I746307
BBa_I746307 Version 1 (Component)
P2 ogr under control of pBAD/araC promoter

BBa_K2120100
BBa_K2120100 Version 1 (Component)
reverse arac-pBAD

BBa_I746308
BBa_I746308 Version 1 (Component)
PSP3 pag under control of pBAD/araC promoter

[pBad/araC
BBa_J01053 Version 1 (Component)
[pBad/araC][StrRBS][TraJF]

araC-CysEm
BBa_K731030 Version 1 (Component)
Inducible araC-pBAD promoter regulating M256I CysE

BBa_K1951004
BBa_K1951004 Version 1 (Component)
DesA producer under PBAD/araC promotor

Ag43 RCF10
BBa_K1352000 Version 1 (Component)
Ag43 with PstI sites removed under the control of pBad/araC promoter

BBa_K1230009
BBa_K1230009 Version 1 (Component)
AraC-pBad-rbs

pUS203
BBa_K1388000 Version 1 (Component)
IntI1 coding region under AraC-pBad control

BBa_K112900
BBa_K112900 Version 1 (Component)
Pbad

araC-CysE
BBa_K731020 Version 1 (Component)
Inducible araC-pBAD promoter regulating WT CysE

BBa_K325909
BBa_K325909 Version 1 (Component)
Lux Operon (under pBAD)<BR><i>Vibrio Fischeri</i>

[pBad/araC
BBa_J01054 Version 1 (Component)
[pBad/araC][StrRBS][TraJF][DblTerminator][OnCFP]