iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
Codon Optimised Sequence Pullcodon_optimisation Version 1 (Activity)Used to indicate that a sequence was codon optimised after pulling from the source and before submission
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
GC Optimised Sequence PullGC_Optimised Version 1 (Activity)Used to indicate that a sequence was GC optimised after pulling from the source and before submission
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
tetA(C)fBBa_J31007 Version 1 (Component)tetracycline resistance protein TetA(C) (forward), [cf. BBa_J31006]
BBa_K382028BBa_K382028 Version 1 (Component)Arabidopsis optimized Brazzein with StrepII C-terminus
BBa_K382026BBa_K382026 Version 1 (Component)Arabidopsis optimized Brazzein with StrepII N-terminus
BBa_K249006BBa_K249006 Version 1 (Component)Fusion EYFP with C-terminal Arginine Tag
BBa_K1321340BBa_K1321340 Version 1 (Component)Double CBD (dCBD) with N-terminal linker
tetA(C)bBBa_J31006 Version 1 (Component)tetracycline resistance protein TetA(C) (backwards) [cf. BBa_J31007]
BBa_K382027BBa_K382027 Version 1 (Component)Arabidopsis optimized Miraculin with StrepII C-terminus tag
BBa_I13458BBa_I13458 Version 1 (Component)promoter C and arabinose C operon
BBa_K382020BBa_K382020 Version 1 (Component)Arabidopsis optimized Brazzein
RFC105 ZBBa_K1362421 Version 1 (Component)C-terminal stop overhang TAAT=STOP+1/3Stop RFC[105] overhang Z
BBa_K382041BBa_K382041 Version 1 (Component)Arabidopsis optimized Brazzein+2xYFP
BBa_K382025BBa_K382025 Version 1 (Component)Arabidopsis optimized Miraculin with StrepII N-terminus tag
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
BBa_K331002BBa_K331002 Version 1 (Component)ECFP with C-terminal Arginine Tag
BBa_K1333005BBa_K1333005 Version 1 (Component)M13 bacteriophage g8p with a FLAG tag on C-terminal
CBDcipABBa_K1615111 Version 1 (Component)CBDcipA with N and C-terminal linker in RFC25
BBa_K1321014BBa_K1321014 Version 1 (Component)CBDCipA with N and C-terminal linker
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_K382052BBa_K382052 Version 1 (Component)Arabidopsis optimized Brazzein (in plant Basta vector)
BBa_K1100006BBa_K1100006 Version 1 (Component)optimized sfGFP with Csy4 insulator loci
BBa_K531006BBa_K531006 Version 1 (Component)Optimized esp gene for <i>C. crescentus</i>
mCherryBBa_J06505 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_K382053BBa_K382053 Version 1 (Component)Arabidopsis optimized Brazzeing (in plant Kan vector)
G-His6(N)BBa_K1362430 Version 1 (Component)C-terminal His6 (N-Intein)
BBa_K249008BBa_K249008 Version 1 (Component)YFP with N-terminal Arganine Tag
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
BBa_K228000BBa_K228000 Version 1 (Component)T7ptag(T7polymerase with amber mutation)
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
mCherryBBa_E2060 Version 1 (Component)derivative of mRFP1, yeast-optimized
eYFP_SH3liBBa_K1602038 Version 1 (Component)eYFP with C-terminal SH3 ligand and RBS BBa_B0034
BBa_K1159316BBa_K1159316 Version 1 (Component)SERK-Receptor TMD with C-terminal GFP and N-terminal <i>Strep</i>-tag II TEV-site linker in RFC[25]
BBa_K2066527BBa_K2066527 Version 1 (Component)B0034 with scar TACTAG
BBa_K1471011BBa_K1471011 Version 1 (Component)RBS (Arabidopsis Thaliana).
His6BBa_K1362431 Version 1 (Component)N-terminal His6 (C-Intein)
eYFP_GBDliBBa_K1602037 Version 1 (Component)eYFP with C-terminal GBD ligand and RBS BBa_B0034
mRFP1BBa_E2050 Version 1 (Component)derivative of mRFP1, yeast-optimized
RFC105 CCBBa_K1362419 Version 1 (Component)C-terminal splicing overhang CAAC=1/3?+Asn RFC[105] standard overhang CC
BBa_K331025BBa_K331025 Version 1 (Component)RBS with C-terminal Oligo Arginine - ECFP Fusion
BBa_K331023BBa_K331023 Version 1 (Component)RBS with C-terminal Oligo Arginine - EYFP Fusion