Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Codon Optimised Sequence Pull
codon_optimisation Version 1 (Activity)
Used to indicate that a sequence was codon optimised after pulling from the source and before submission

pSB1C3
pSB1C3 Version 1 (Component)
High copy BioBrick assembly plasmid

GC Optimised Sequence Pull
GC_Optimised Version 1 (Activity)
Used to indicate that a sequence was GC optimised after pulling from the source and before submission

mCherry
BBa_J06504 Version 1 (Component)
monomeric RFP optimized for bacteria

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_K382053
BBa_K382053 Version 1 (Component)
Arabidopsis optimized Brazzeing (in plant Kan vector)

BBa_K382052
BBa_K382052 Version 1 (Component)
Arabidopsis optimized Brazzein (in plant Basta vector)

BBa_P10598
BBa_P10598 Version 1 (Component)
GoldenBraid destination vector omega insert

BBa_P10599
BBa_P10599 Version 1 (Component)
GoldenBraid destination vector alpha insert

BBa_K1321338
BBa_K1321338 Version 1 (Component)
T7 Expression vector

BBa_K382020
BBa_K382020 Version 1 (Component)
Arabidopsis optimized Brazzein

BBa_K382041
BBa_K382041 Version 1 (Component)
Arabidopsis optimized Brazzein+2xYFP

pSB1AT3
pSB1AT3 Version 1 (Component)
High copy BioBrick assembly plasmid

BBa_J61002
BBa_J61002 Version 1 (Component)
EX-Ptet-S-rbsRFP-P "RFP reporter"

kanR
BBa_P1003 Version 1 (Component)
kanamycin resistance cassette

mCherry
BBa_J06505 Version 1 (Component)
monomeric RFP optimized for bacteria

BBa_K382050
BBa_K382050 Version 1 (Component)
Arabidopsis optimized Miraculin in Agrobacteria expression vector

BBa_K382051
BBa_K382051 Version 1 (Component)
Arabidopsis optimized Miraculin in Agrobacteria expression vector

BBa_K382026
BBa_K382026 Version 1 (Component)
Arabidopsis optimized Brazzein with StrepII N-terminus

BBa_K382028
BBa_K382028 Version 1 (Component)
Arabidopsis optimized Brazzein with StrepII C-terminus

BBa_J70029
BBa_J70029 Version 1 (Component)
RBS + mCherry gene, optimized for expression in Me. florum and E. coli

BBa_K382061
BBa_K382061 Version 1 (Component)
amiRNA LUT2 knockdown in Kan plant expression vector

BBa_K382065
BBa_K382065 Version 1 (Component)
amiRNA LTP knockdown in Kan plant expression vector

BBa_K382063
BBa_K382063 Version 1 (Component)
amiRNA LYC knockdown in Kan plant expression vector

BBa_K209399
BBa_K209399 Version 1 (Component)
AarI A-D acceptor vector

BBa_K382055
BBa_K382055 Version 1 (Component)
amiRNA GFP knockdown 1 in Kan plant expression vector

BBa_K382057
BBa_K382057 Version 1 (Component)
amiRNA GFP knockdown 2 in Kan plant expression vector

mCherry
BBa_E2060 Version 1 (Component)
derivative of mRFP1, yeast-optimized

BBa_K382062
BBa_K382062 Version 1 (Component)
amiRNA beta-Ohase 1 knockdown in Kan plant expression vector

BBa_K1471011
BBa_K1471011 Version 1 (Component)
RBS (Arabidopsis Thaliana).

mRFP1
BBa_E2050 Version 1 (Component)
derivative of mRFP1, yeast-optimized

BBa_K382067
BBa_K382067 Version 1 (Component)
intron hairpin RNAi knockdown of Ger allergen in Kan plant vector

BBa_K382071
BBa_K382071 Version 1 (Component)
intron hairpin RNAi knockdown of LTP allergen in Kan plant vector

BBa_K1742004
BBa_K1742004 Version 1 (Component)
PhiC31 Plant codon optimized

BBa_K1051003
BBa_K1051003 Version 1 (Component)
Stop codon free GFP in RFC[23] standard

yfp
BBa_K165005 Version 1 (Component)
Venus YFP, yeast optimized for fusion

BBa_K382069
BBa_K382069 Version 1 (Component)
intron hairpin RNAi knockdown of Bet v 1 allergen in Kan plant vector

BBa_K382064
BBa_K382064 Version 1 (Component)
amiRNA LTP knockdown in Basta plant expression vector

BBa_K382060
BBa_K382060 Version 1 (Component)
amiRNA LYC knockdown in Basta plant expression vector

BBa_K382058
BBa_K382058 Version 1 (Component)
amiRNA LUT2 knockdown in Basta plant expression vector

HisTag
BBa_J18909 Version 1 (Component)
His tag (6xHis; E. coli - optimized)

BBa_E2030
BBa_E2030 Version 1 (Component)
enhanced version of EYFP, yeast-optimized

pSB1A2
pSB1A2 Version 1 (Component)
pSB1A2 (Replaced by pSB1A3)

BBa_K382021
BBa_K382021 Version 1 (Component)
Arabidopsis optimized Miraculin

BBa_K382054
BBa_K382054 Version 1 (Component)
amiRNA GFP knockdown 1 in Basta plant expression vector