Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxrBBa_C0062 Version 1 (Component)luxR repressor/activator, (no LVA?)
tADH1BBa_J63002 Version 1 (Component)ADH1 terminator from S. cerevisiae
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K1051008BBa_K1051008 Version 1 (Component)S. cerevisiae CAA terminator with stopcodon
BBa_M36531BBa_M36531 Version 1 (Component)Arsenate Bioremediation Actuator in S. Cerevisiae
BBa_M36530BBa_M36530 Version 1 (Component)Arsenate Bioremediation Actuator in S. Cerevisiae
BBa_M36532BBa_M36532 Version 1 (Component)Arsenate Bioremediation Actuator in S. Cerevisiae
lasrBBa_C0079 Version 1 (Component)lasR activator from P. aeruginosa PAO1(+LVA)
//ss Version 1 (Collection) araCBBa_C0080 Version 1 (Component)araC arabinose operon regulatory protein (repressor/activator) from E. coli (+LVA)
lasRBBa_C0179 Version 1 (Component)lasR activator from P. aeruginosa PAO1(no LVA)
BBa_M36533BBa_M36533 Version 1 (Component)Arsenate Bioremediation Actuator Plasmid Containing PHO84 Gene
BBa_M36958BBa_M36958 Version 1 (Component)Plasmid design for Arsenic Bioremediation Actuator in S. Cerevisiae
BBa_M36534BBa_M36534 Version 1 (Component)Arsenate Bioremediation Actuator Plasmid Containing ACR 1 and ACR 2 Genes
rhlRBBa_C0071 Version 1 (Component)rhlR repressor/activator from P. aeruginosa PA3477 (+LVA)
BBa_I746352BBa_I746352 Version 1 (Component)delta activator from phiR73 phage
cinrBBa_C0077 Version 1 (Component)cinR activator from Rhizobium leguminosarum (+LVA)
BBa_I746104BBa_I746104 Version 1 (Component)P2 promoter in agr operon from S. aureus
rhIRBBa_C0171 Version 1 (Component)rhlR repressor/activator from P. aeruginosa PA3477 (no LVA)
BBa_J61002BBa_J61002 Version 1 (Component)EX-Ptet-S-rbsRFP-P "RFP reporter"
BBa_M36092BBa_M36092 Version 1 (Component)S. cerevisiae actuator test rig
mnt (s)BBa_C0072 Version 1 (Component)mnt repressor (strong) from Salmonella phage P22 (+LVA)
BBa_K1051007BBa_K1051007 Version 1 (Component)S. cerevisiae SSV7 terminator with stopcodon
BBa_I746350BBa_I746350 Version 1 (Component)ogr activator from P2 phage
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
BBa_K1969003BBa_K1969003 Version 1 (Component)Full length S. cerevisiae ADH1 promoter
adh2BBa_K273005 Version 1 (Component)Alcohol Dehydrogenase 2 (adh2 , adhII, adhB) from <i>S. cerevisiae</i>
BBa_I735001BBa_I735001 Version 1 (Component)pho80 coding sequence in S cerevisiae
BBa_K1690000BBa_K1690000 Version 1 (Component)Mating pheromone (S. cerevisiae)
BBa_K1355004BBa_K1355004 Version 1 (Component)Mercury ions bioremediating device
BBa_K1907005BBa_K1907005 Version 1 (Component)CCP1 promoter for S. cerevisiae
BBa_K1907004BBa_K1907004 Version 1 (Component)TSA1 promoter for S. cerevisiae
BBa_K1907003BBa_K1907003 Version 1 (Component)CTT1 promoter for S. cerevisiae
BBa_M11206BBa_M11206 Version 1 (Component)mNarK promoter + RFP to monitor oxygen monitors in S. cerevisiae
BBa_K363010BBa_K363010 Version 1 (Component)Crz1, general stress response transcriptional activator from S. cerevisiae
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard
BBa_K300979BBa_K300979 Version 1 (Component)S288C S. cerevisiae strain
BBa_M11201BBa_M11201 Version 1 (Component)pRS316 plasmid for S. cerevisiae in BioBrick format
BBa_K1321003BBa_K1321003 Version 1 (Component)Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25
BBa_I746351BBa_I746351 Version 1 (Component)pag activator from PSP3 phage
BBa_K1497030BBa_K1497030 Version 1 (Component)Scaffold (S-S)
BBa_M34571BBa_M34571 Version 1 (Component)Coding Sequence for ARR2/ACR2 from S. Cerevisiae.
BBa_M34570BBa_M34570 Version 1 (Component)Coding Sequence for ARR1/ACR1 from S. Cerevisiae
BBa_J24813BBa_J24813 Version 1 (Component)URA3 Promoter from S. cerevisiae
BBa_M11204BBa_M11204 Version 1 (Component)HXT7 promoter + GFP to monitor glucose levels in S. cerevisiae