SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
cheZBBa_K629003 Version 1 (Component)cheZ, chemotaxis regulator, protein phosphatase for CheY
BBa_K1054009BBa_K1054009 Version 1 (Component)Atrazine chemotaxis module
cheBBBa_C0024 Version 1 (Component)CheB chemotaxis coding sequence (protein glutamate methylesterase)
cheYBBa_C0020 Version 1 (Component)CheY "tumbling" chemotaxis coding sequence
BBa_I752001BBa_I752001 Version 1 (Component)CheZ coding sequence (Chemotaxis protein)
pET fusionBBa_K1122673 Version 1 (Component)Ethanol production module
cherBBa_C0028 Version 1 (Component)CheR chemotaxis coding region
atRS-RFPBBa_K537008 Version 1 (Component)Atrazine Riboswitch-mRFP
BBa_K873001BBa_K873001 Version 1 (Component)cheZ chemotaxis
BBa_M50055BBa_M50055 Version 1 (Component)Atrazine biosensor
BBa_M50048BBa_M50048 Version 1 (Component)Atrazine riboswitch
atRS-ChZBBa_K537000 Version 1 (Component)Atrazine Riboswitch-CheZ fusion
C2HP/RGEBBa_K1442107 Version 1 (Component)C2HP Testing Module (reverse GFP)
BBa_J56000BBa_J56000 Version 1 (Component)chemotaxis receptor
ldhE-LcBBa_K1696001 Version 1 (Component)L-Lactate producing module from Lactobacillus casei
TamuraBBa_K1763444 Version 1 (Component)Bombyx mori silk co-spinning module
BBa_K510036BBa_K510036 Version 1 (Component)Improved Flip Flop (Module II: asRNA)
mCherryBBa_K678020 Version 1 (Component)mCherry-module
Atrazine-RBBa_K1145003 Version 1 (Component)A ribosome switch which can be opened by atrazine.
BBa_M11012BBa_M11012 Version 1 (Component)CheA Chemotaxis reception protein
BBa_K249028BBa_K249028 Version 1 (Component)Theophylline Induced Chemotaxis
BBa_K1371039BBa_K1371039 Version 1 (Component)loading module+module(1+2)
mRFP1BBa_K678030 Version 1 (Component)mRFP1-module
BBa_K1364000BBa_K1364000 Version 1 (Component)N-acetylatedGlucosamine based chemotaxis for Bacillus subtilis
eYFPBBa_K678009 Version 1 (Component)eYFP-module
BBa_K537014BBa_K537014 Version 1 (Component)Promoter-Atrazine riboswitch-mCherry-Double terminator
BBa_I744205BBa_I744205 Version 1 (Component)Tsr (Methyl-accepting Chemotaxis Receptor), E.coli
TrzNBBa_K1145002 Version 1 (Component)A degrading enzyme which can degrade atrazine.
BBa_K1054008BBa_K1054008 Version 1 (Component)pLAC promotor,atrazine-inducible Riboswitch, GFP+Terminator
BBa_I4204BBa_I4204 Version 1 (Component)Prakash *: Syncronator Cell-Signalling Module
BBa_J56018BBa_J56018 Version 1 (Component)CheW, wild-type chemotaxis signaling protein
TRMBBa_K1145001 Version 1 (Component)A transporter which is involved in transporting atrazine.
eGFP-PTSBBa_K678017 Version 1 (Component)eGFP-PTS-module
BBa_K537015BBa_K537015 Version 1 (Component)Promoter-Atrazine riboswitch-CheZ-mCherry-Double terminator
BBa_K564021BBa_K564021 Version 1 (Component)aTC regulated promoter module: aTC--PoPS
fliC_MCSBBa_K1617000 Version 1 (Component)Modular Flagellin - FliC_MCS
eCFPBBa_K678015 Version 1 (Component)eCFP-module
BBa_K1371004BBa_K1371004 Version 1 (Component)AT-ACP-L1(loading module)
BBa_K510019BBa_K510019 Version 1 (Component)Improved Flip Flop (Module I)
BBa_K1412829BBa_K1412829 Version 1 (Component)Characterize efficiency of RBS with chemotaxis
BBa_K1593003BBa_K1593003 Version 1 (Component)Chemotaxis related protein cheZ from Pseudomonas aeruginosa
BBa_K1412801BBa_K1412801 Version 1 (Component)Characterize efficiency of RBS with chemotaxis
BBa_K422001BBa_K422001 Version 1 (Component)Archeal light receptor fused to bacterial chemotaxis transducer
BBa_K1020008BBa_K1020008 Version 1 (Component)alkane producing module
BBa_K103011BBa_K103011 Version 1 (Component)linker module g_s_g