Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_B0030
BBa_B0030 Version 1 (Component)
RBS.1 (strong) -- modified from R. Weiss

BBa_I13507
BBa_I13507 Version 1 (Component)
Screening plasmid intermediate

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Prm +
BBa_I12007 Version 1 (Component)
Modified lambda Prm promoter (OR-3 obliterated)

BBa_J13002
BBa_J13002 Version 1 (Component)
TetR repressed POPS/RIPS generator

BBa_J04500
BBa_J04500 Version 1 (Component)
IPTG inducible promoter with RBS

BBa_I13001
BBa_I13001 Version 1 (Component)
RBS B0030 w/ YFP (-LVA) TT

BBa_I13002
BBa_I13002 Version 1 (Component)
RBS B0031 w/ YFP (-LVA) TT

BBa_M31507
BBa_M31507 Version 1 (Component)
BBa_M13007 modified to remove overlap with g9 downstream

BBa_I13003
BBa_I13003 Version 1 (Component)
medium RBS, YFP (-LVA), double terminator

BBa_M13007
BBa_M13007 Version 1 (Component)
M13K07 gene VII

BBa_M13507
BBa_M13507 Version 1 (Component)
M13KO7 gene VII RBS

tetA(C)b
BBa_J31006 Version 1 (Component)
tetracycline resistance protein TetA(C) (backwards) [cf. BBa_J31007]

BBa_I13027
BBa_I13027 Version 1 (Component)
penI QPI intermediate

BBa_M13009
BBa_M13009 Version 1 (Component)
M13K07 gene IX

BBa_M13008
BBa_M13008 Version 1 (Component)
M13KO7 gene VIII

BBa_I13907
BBa_I13907 Version 1 (Component)
Ring Oscillator Synchronization Device (lac)

BBa_M31509
BBa_M31509 Version 1 (Component)
BBa_M13009 modified to remove overlap with g8 downstream

BBa_M13002
BBa_M13002 Version 1 (Component)
M13K07 gene II

BBa_M13003
BBa_M13003 Version 1 (Component)
M13K07 gene III

BBa_M13005
BBa_M13005 Version 1 (Component)
M13K07 gene V

BBa_M31007
BBa_M31007 Version 1 (Component)
M13K07 gene 7 refactored

BBa_M13001
BBa_M13001 Version 1 (Component)
M13K07 gene I

BBa_M13004
BBa_M13004 Version 1 (Component)
M13K07 gene IV

BBa_M13006
BBa_M13006 Version 1 (Component)
M13K07 gene VI

BBa_M11007
BBa_M11007 Version 1 (Component)
NADH-dependent butanol dehydrogenase A (bdhA/BDH I)

BBa_M1307
BBa_M1307 Version 1 (Component)
M13K07 genome

BBa_M1300
BBa_M1300 Version 1 (Component)
Phap

Prm +
BBa_I12006 Version 1 (Component)
Modified lamdba Prm promoter (repressed by 434 cI)

BBa_I13307
BBa_I13307 Version 1 (Component)
R0011.I13277 Lac-Regulated Cin Amplifier

BBa_I13007
BBa_I13007 Version 1 (Component)
RBS Test R0011.B0030.E0130

BBa_I11007
BBa_I11007 Version 1 (Component)
pZE2 PLtetO-1 plasmid--MCS2

BBa_J64101
BBa_J64101 Version 1 (Component)
ColE1 biobrick plasmid with backward terminator

BBa_M1007
BBa_M1007 Version 1 (Component)
Complete Phasin Secretion Construct

BBa_J13007
BBa_J13007 Version 1 (Component)
Polycistronic CFP/YFP + Monocistronic mCherry

BBa_I13207
BBa_I13207 Version 1 (Component)
HSL/aiiA test construct

pMalT
BBa_J03007 Version 1 (Component)
Maltose specific promotor

link
BBa_I13000 Version 1 (Component)
linker sequence between lux systems

BBa_I15007
BBa_I15007 Version 1 (Component)
ho1 and pcyA (PCB biosynthetic genes) ORFs from synechocystis

BBa_I713007
BBa_I713007 Version 1 (Component)
pEB T7X / Amp Kan

BBa_I13607
BBa_I13607 Version 1 (Component)
Lac YFP Tet CFP (Ly+Tc+)

BBa_J13000
BBa_J13000 Version 1 (Component)
3OC6HSL+LuxR dependent LacZalpha generator

BBa_I13107
BBa_I13107 Version 1 (Component)
Low output control (lac QPI, Elowitz RBS)

BBa_J11007
BBa_J11007 Version 1 (Component)
completed 2 color temperature sensor

BBa_I13005
BBa_I13005 Version 1 (Component)
Promoter R0011 w/ YFP (-LVA) TT

BBa_I13006
BBa_I13006 Version 1 (Component)
Promoter R0040 w/ YFP (-LVA) TT

BBa_J15001
BBa_J15001 Version 1 (Component)
strong synthetic E. coli ribosome binding site with SacI site.

BBa_I13008
BBa_I13008 Version 1 (Component)
RBS Test R0011.B0031.E0130