Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0030BBa_B0030 Version 1 (Component)RBS.1 (strong) -- modified from R. Weiss
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter
Prm +BBa_I12007 Version 1 (Component)Modified lambda Prm promoter (OR-3 obliterated)
pSC101BBa_I50041 Version 1 (Component)pSC101 origin of replication, reverse
Prm +BBa_I12006 Version 1 (Component)Modified lamdba Prm promoter (repressed by 434 cI)
BBa_K351010BBa_K351010 Version 1 (Component)Back Part of modified FGFR
BBa_K209402BBa_K209402 Version 1 (Component)AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]
BBa_K351009BBa_K351009 Version 1 (Component)Front Part of modified FGFR
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_K209400BBa_K209400 Version 1 (Component)AarI B-C part, hM4D
RFP2BBa_I715023 Version 1 (Component)Carboxyl portion of RFP
BBa_K1114300BBa_K1114300 Version 1 (Component)This is the MoClo formatted part of BBa_B0015.
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
BLpBBa_K238013 Version 1 (Component)Exact promoter of the blue light receptor
RFP1BBa_I715022 Version 1 (Component)Amino Portion of RFP
BBa_K1321003BBa_K1321003 Version 1 (Component)Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25
BBa_K239006BBa_K239006 Version 1 (Component)Modified NarK promoter
BBa_S03119BBa_S03119 Version 1 (Component)--Specify Parts List--
GFP1BBa_I715019 Version 1 (Component)Amino Half of GFP (aka GFP1)
GFP2BBa_I715020 Version 1 (Component)Carboxyl Half of GFP (aka GFP2)
BBa_I714031BBa_I714031 Version 1 (Component)OriT-R (Origin of Transfer for the R751-plasmid nic region)
BBa_K209415BBa_K209415 Version 1 (Component)AarI B-C part, hM2D
BBa_K737017BBa_K737017 Version 1 (Component)This part conteins gvpC-20psi protein
OriTRBBa_J01003 Version 1 (Component)OriT-R (Origin of transfer for the R-plasmid nic region)
BBa_J70042BBa_J70042 Version 1 (Component)6his part for use with BioScaffold parts ATG-6his-GGATCC (glycine serine)
mCherryBBa_E2060 Version 1 (Component)derivative of mRFP1, yeast-optimized
BBa_K576003BBa_K576003 Version 1 (Component)Left Part of Self-Excising Ribozyme
BBa_K576004BBa_K576004 Version 1 (Component)Right Part of Self-Excising Ribozyme
BBa_K2066508BBa_K2066508 Version 1 (Component)Modified pLacO-1 Promoter (Lou et. al 2012)
BBa_K1440088BBa_K1440088 Version 1 (Component)long parts consist of part2 and part3
BBa_I12036BBa_I12036 Version 1 (Component)Modified lamdba Prm promoter (cooperative repression by 434 cI)
mRFP1BBa_E2050 Version 1 (Component)derivative of mRFP1, yeast-optimized
BBa_T1001BBa_T1001 Version 1 (Component)Kill this part
R6KBBa_J61001 Version 1 (Component)[R6K] Origin of replication
BBa_K1331004BBa_K1331004 Version 1 (Component)Modified rhlB coding sequence from Pseudomonas aeruginosa SQ6
BBa_K209401BBa_K209401 Version 1 (Component)AarI B-C part, Rs1.3
FGFR-1BBa_K976000 Version 1 (Component)Fibroblast Growth Factor-1 Receptor Coding Sequence
BBa_K1331001BBa_K1331001 Version 1 (Component)Modified rhlA coding sequence from Pseudomonas aeruginosa SQ6
BBa_J70031BBa_J70031 Version 1 (Component)Linker for BioScaffold Parts, example of Gamma BioScaffold part
BBa_K1114301BBa_K1114301 Version 1 (Component)This is MoClo formatted part of BBa_B0015