iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
GFP reportBBa_E0240 Version 1 (Component)GFP generator
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
GFP generaBBa_E0840 Version 1 (Component)GFP generator
BTE generaBBa_K558007 Version 1 (Component)Bay Laurel Thioesterse Generator for Fatty Acid Production
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
LuxRBBa_I0462 Version 1 (Component)luxR Protein Generator
FurBO_11498 Version 1 (Component) hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_J13002BBa_J13002 Version 1 (Component)TetR repressed POPS/RIPS generator
BBa_K081014BBa_K081014 Version 1 (Component)RFP protein generator - PoPS->RFP
FadABBa_K861400 Version 1 (Component)FadA protein coding sequence for fatty acid degradation
BBa_K558008BBa_K558008 Version 1 (Component)Bay Laurel Thioesterase coding region
BTEBBa_K558003 Version 1 (Component)Bay Laurel Thioesterase (RBS Terminator)
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_K861030BBa_K861030 Version 1 (Component)FadB, gene for fatty acid degradation from E.coli K12
BBa_K861042BBa_K861042 Version 1 (Component)FadA, gene for fatty acid degradation from <i>Salmonella enterica</i> LT2
BBa_K861031BBa_K861031 Version 1 (Component)FadJ, gene for fatty acid degradation from <i>E.coli str. K12</i>
BBa_K1507003BBa_K1507003 Version 1 (Component)Fatty Acid Desaturase 6 (FAD6)
BBa_K1472601BBa_K1472601 Version 1 (Component)Leaderless thioesterase
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
BBa_K1747004BBa_K1747004 Version 1 (Component)Fatty acid inducible promoter - no scar - RBS
BSMT1BBa_J45004 Version 1 (Component)SAM:benzoic acid/salicylic acid carboxyl methyltransferase I; converts salicylic acid to methyl sali
BBa_I0466BBa_I0466 Version 1 (Component)RhlR Protein Generator
BBa_K861500BBa_K861500 Version 1 (Component)FadL, Long-chain fatty acids transporter from <i>E.coli str. K12</i>
BBa_J23008BBa_J23008 Version 1 (Component)[key3c] riboregulator for lock3 variants
BBa_K1547008BBa_K1547008 Version 1 (Component)FAD3 for omega 3 fatty acid synthesis
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_M1679BBa_M1679 Version 1 (Component)Fatty acid synthetase promoter
scarBBa_G0000 Version 1 (Component)SpeI/XbaI scar for RBS-CDS junctions
loxBBa_J61046 Version 1 (Component)[Lox] site for recombination
BBa_M11058BBa_M11058 Version 1 (Component)pfaA gene for omega-3 fatty acid synthesis
BBa_M11059BBa_M11059 Version 1 (Component)pfaB gene for omega-3 fatty acid synthesis
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_K861041BBa_K861041 Version 1 (Component)FadI, gene for fatty acid degradation from <i>E.coli str. K12</i>
RcsBBBa_K200000 Version 1 (Component)Colanic acid global regulator -> RcsB
BBa_K553003BBa_K553003 Version 1 (Component)constitutive production of LasR trans-activator
BBa_M11569BBa_M11569 Version 1 (Component)psbA2 controlled Thioesterase generator
BBa_M11062BBa_M11062 Version 1 (Component)pfaC gene for omega-3 polyunsaturated fatty acid synthase