ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Reverse Orientation Sequence Pullreverse_orientation Version 1 (Activity)Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission
BBa_B0034BBa_B0034 Version 1 (Component)RBS (Elowitz 1999) -- defines RBS efficiency
LacIBBa_R0010 Version 1 (Component)promoter (lacI regulated)
BBa_B0030BBa_B0030 Version 1 (Component)RBS.1 (strong) -- modified from R. Weiss
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
p(tetR)BBa_R0040 Version 1 (Component)TetR repressible promoter
pBad/araCBBa_I0500 Version 1 (Component)Inducible pBad/araC promoter
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
lacI+pLBBa_R0011 Version 1 (Component)Promoter (lacI regulated, lambda pL hybrid)
BBa_J23100BBa_J23100 Version 1 (Component)constitutive promoter family member
BBa_J23106BBa_J23106 Version 1 (Component)constitutive promoter family member
BBa_I13453BBa_I13453 Version 1 (Component)Pbad promoter
pT7BBa_I719005 Version 1 (Component)T7 Promoter
GFP reportBBa_E0240 Version 1 (Component)GFP generator
BBa_J23119BBa_J23119 Version 1 (Component)constitutive promoter family member
pT7BBa_K525998 Version 1 (Component)Promoter T7 and RBS
lux pRBBa_R0062 Version 1 (Component)Promoter (luxR & HSL regulated -- lux pR)
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
cI lamBBa_R0051 Version 1 (Component)promoter (lambda cI regulated)
BBa_J23101BBa_J23101 Version 1 (Component)constitutive promoter family member
P(Lac) IQBBa_I14032 Version 1 (Component)promoter P(Lac) IQ
GFP generaBBa_E0840 Version 1 (Component)GFP generator
cI+luxRBBa_R0065 Version 1 (Component)Promoter (lambda cI and luxR regulated -- hybrid)
BBa_I712074BBa_I712074 Version 1 (Component)T7 promoter (strong promoter from T7 bacteriophage)
BBa_J44001BBa_J44001 Version 1 (Component)Reverse RBS (RBS<sub>rev</sub>) -- corresponds to BBa_B0030
OmpRBBa_R0082 Version 1 (Component)Promoter (OmpR, positive)
BBa_I712004BBa_I712004 Version 1 (Component)CMV promoter
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
T7 RBSBBa_K1362090 Version 1 (Component)strong T7 RBS
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
BBa_J23114BBa_J23114 Version 1 (Component)constitutive promoter family member
BBa_J85600BBa_J85600 Version 1 (Component)attB1 recombination site
BBa_J23102BBa_J23102 Version 1 (Component)constitutive promoter family member
BBa_C0261BBa_C0261 Version 1 (Component)AHL-making Enzyme, luxI (+RBS)
FlipFlopBBa_K907002 Version 1 (Component)Binary signal generator, RBS(reverse) - attB - Promoter - attP - RBS
FlipFlopBBa_K907003 Version 1 (Component)Binary signal generator, promoter reversed, RBS(reverse) - attB - Promoter(reverse) - attP - RBS
BBa_B0025BBa_B0025 Version 1 (Component)double terminator (B0015), reversed
BBa_J23104BBa_J23104 Version 1 (Component)constitutive promoter family member
pSC101BBa_I50041 Version 1 (Component)pSC101 origin of replication, reverse
//rbsrbs Version 1 (Collection) BBa_J23110BBa_J23110 Version 1 (Component)constitutive promoter family member
RBS-spoVGBBa_K143021 Version 1 (Component)SpoVG ribosome binding site (RBS) for B. subtilis