ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project

SyBiOntKB to SBOL conversion
SyBiOntKB2sbol Version 1 (Activity)
Conversion of the Synthetic Biology Ontology knowledge base to SBOL 2.1

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

Sequence Cut Out of Plasmid
cut_out_of_plasmid Version 1 (Activity)
Used to indicate that a sequence was cut out of the plasmid referenced as the source

BBa_B0034
BBa_B0034 Version 1 (Component)
RBS (Elowitz 1999) -- defines RBS efficiency

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Reverse Orientation Sequence Pull
reverse_orientation Version 1 (Activity)
Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission

Codon Optimised Sequence Pull
codon_optimisation Version 1 (Activity)
Used to indicate that a sequence was codon optimised after pulling from the source and before submission

pSB1C3
pSB1C3 Version 1 (Component)
High copy BioBrick assembly plasmid

BBa_J04450
BBa_J04450 Version 1 (Component)
RFP Coding Device

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_B0025
BBa_B0025 Version 1 (Component)
double terminator (B0015), reversed

BBa_J64101
BBa_J64101 Version 1 (Component)
ColE1 biobrick plasmid with backward terminator

BBa_I51001
BBa_I51001 Version 1 (Component)
BioBrick base vector, as revised by Codon Devices

BBa_P10598
BBa_P10598 Version 1 (Component)
GoldenBraid destination vector omega insert

BBa_P10599
BBa_P10599 Version 1 (Component)
GoldenBraid destination vector alpha insert

BBa_I51019
BBa_I51019 Version 1 (Component)
BioBrick base vector, as synthesized by Codon Devices

BBa_K1321338
BBa_K1321338 Version 1 (Component)
T7 Expression vector

BBa_B0024
BBa_B0024 Version 1 (Component)
double terminator (B0012-B0011), reversed

BBa_I763026
BBa_I763026 Version 1 (Component)
LacI coding device regulated by pTetR

BBa_J09855
BBa_J09855 Version 1 (Component)
Constitutive luxR device with pLuxR

pSB1AT3
pSB1AT3 Version 1 (Component)
High copy BioBrick assembly plasmid

BBa_K228009
BBa_K228009 Version 1 (Component)
AraC protein(reversed sequence) and Pbad promoter

BBa_I13452
BBa_I13452 Version 1 (Component)
Adds another BioBrick site

BBa_J64100
BBa_J64100 Version 1 (Component)
Medium copy ColE1 BioBrick vector

BBa_K844000
BBa_K844000 Version 1 (Component)
10x-Histidine (10x-His) Tag with double stop codon (TAATAA)

BBa_J61002
BBa_J61002 Version 1 (Component)
EX-Ptet-S-rbsRFP-P "RFP reporter"

BBa_K1051003
BBa_K1051003 Version 1 (Component)
Stop codon free GFP in RFC[23] standard

BBa_I51000
BBa_I51000 Version 1 (Component)
BioBrick base vector, as originally designed

BBa_K1813019
BBa_K1813019 Version 1 (Component)
LacI Repressor Reversed

BBa_K1051000
BBa_K1051000 Version 1 (Component)
Stop codon free RFP in RFC[23] standard

BB base ve
BBa_I51020 Version 1 (Component)
BioBrick base vector (for constructing pSB**5 vectors)

BBa_F1610
BBa_F1610 Version 1 (Component)
3OC₆HSL Sender Device

BBa_F2622
BBa_F2622 Version 1 (Component)
3OC₆HSL Receiver Device

Prm +
BBa_I12006 Version 1 (Component)
Modified lamdba Prm promoter (repressed by 434 cI)

BBa_K209399
BBa_K209399 Version 1 (Component)
AarI A-D acceptor vector

BBa_K299107
BBa_K299107 Version 1 (Component)
T.xbaI.G (T followed by xbaI site and additional G to behave like biobrick prefix after xbaI digest)

BBa_B0021
BBa_B0021 Version 1 (Component)
LuxICDABEG (+/-), reversed

pTG262-BB
BBa_I742123 Version 1 (Component)
Multi-host vector pTG262 converted to BioBrick vector

BBa_T9002
BBa_T9002 Version 1 (Component)
GFP Producer Controlled by 3OC6HSL Receiver Device

Prefix
BBa_G00000 Version 1 (Component)
BioBrick cloning site prefix

BBa_K809601
BBa_K809601 Version 1 (Component)
GAL promoter (kozak) without start codon ATG

Suffix
BBa_G00001 Version 1 (Component)
BioBrick cloning site suffix

BBa_K300010
BBa_K300010 Version 1 (Component)
PoPS-based self-inducible device

BBa_K624033
BBa_K624033 Version 1 (Component)
minC cell division inhibitor (revised)

BBa_K300001
BBa_K300001 Version 1 (Component)
BioBrick integrative base vector for S. cerevisiae

pSB1A2
pSB1A2 Version 1 (Component)
pSB1A2 (Replaced by pSB1A3)

BBa_K300000
BBa_K300000 Version 1 (Component)
BioBrick integrative base vector for E. coli