Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Amp CasBBa_I13800 Version 1 (Component)Ampicillin Resistance Cassette
pSB1C3pSB1C3 Version 1 (Component)High copy BioBrick assembly plasmid
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
BBa_I716375BBa_I716375 Version 1 (Component)Biobricked Mutant Hemoglobin Cassette in petDUET format with hemABCD
BBa_I716377BBa_I716377 Version 1 (Component)Biobricked Mutant Hemoglobin Cassette in petDUET format with hemABCD with cytochromes
BBa_I716379BBa_I716379 Version 1 (Component)Biobricked Mutant Hemoglobin Cassette in petDUET format with hemABCD with AHSP
BBa_I716381BBa_I716381 Version 1 (Component)Biobricked Mutant Hemoglobin Cassette in petDUET format with hemABCD with antioxidants
BBa_I716374BBa_I716374 Version 1 (Component)Biobricked Unmodified Hemoglobin Cassette in petDUET format with hemABCD
BBa_I716376BBa_I716376 Version 1 (Component)Biobricked Hemoglobin Cassette in petDUET format with hemABCD with cytochromes
BBa_K314103BBa_K314103 Version 1 (Component)Lac induced expression cassette
BBa_I716356BBa_I716356 Version 1 (Component)Biobricked Mutant Hemoglobin Cassette in petDUET format
BBa_I716380BBa_I716380 Version 1 (Component)Biobricked Unmodified Hemoglobin Cassette in petDUET format with hemABCD with antioxidants
BBa_I716378BBa_I716378 Version 1 (Component)Biobricked Unmodified Hemoglobin Cassette in petDUET format with hemABCD with AHSP
BBa_I716354BBa_I716354 Version 1 (Component)Biobricked Unmodified Hemoglobin Cassette in petDUET format
BBa_K1321337BBa_K1321337 Version 1 (Component)sfGFP in Freiburg format (RFC 25)
RBS_cassetteRBS_cassette Version 1 (Component)AvrII restriction site (cctagg), overlapped with RBS (aggagga)
BBa_K314100BBa_K314100 Version 1 (Component)High constitutive expression cassette
BBa_K1114107BBa_K1114107 Version 1 (Component)Bicistronic Design RBS 2, MoClo Format with BC fusion sites
kanRBBa_P1003 Version 1 (Component)kanamycin resistance cassette
BBa_K1321009BBa_K1321009 Version 1 (Component)Nickel Binding Protein (NiBP) Freiburg format (RFC[25])
BBa_K1321011BBa_K1321011 Version 1 (Component)SmtA metallothionein in Freiburg format (RFC[25])
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_K112305BBa_K112305 Version 1 (Component){rbs.lambda lysozyme!} in BBb format
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
pSB1AT3pSB1AT3 Version 1 (Component)High copy BioBrick assembly plasmid
BBa_K1321012BBa_K1321012 Version 1 (Component)fMT metallothionein in Freiburg format (RFC[25])
BBa_I13452BBa_I13452 Version 1 (Component)Adds another BioBrick site
BBa_K809605BBa_K809605 Version 1 (Component)Lambda Holin in BBa format
BBa_K228000BBa_K228000 Version 1 (Component)T7ptag(T7polymerase with amber mutation)
RBS-RFPBBa_K093005 Version 1 (Component)RFP with RBS
BBa_K358006BBa_K358006 Version 1 (Component)lambda lysis cassette with terminator
BBa_K1114005BBa_K1114005 Version 1 (Component)The MoClo format of BBa_J23104 with AB fusion sites.
BBa_K2066527BBa_K2066527 Version 1 (Component)B0034 with scar TACTAG
BBa_K1321200BBa_K1321200 Version 1 (Component)J23101+B0034+VHb (Vitreoscilla haemoglobin)
BBa_J72092BBa_J72092 Version 1 (Component){KanR Cassette} in BglBrick Format
BBa_K1321351BBa_K1321351 Version 1 (Component)CBDcenA with linker fused to NiBP in Freiburg format (RFC 25)