Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K1321340BBa_K1321340 Version 1 (Component)Double CBD (dCBD) with N-terminal linker
BBa_K1462501BBa_K1462501 Version 1 (Component)GBD domian + Linker
BBa_K1979003BBa_K1979003 Version 1 (Component)PBP5 coding device (promoter+PBP5+T7 terminator)
lexA DBDBBa_K165009 Version 1 (Component)LexA DNA-binding domain
CBDBBa_K1830003 Version 1 (Component)CBD
BBa_K364309BBa_K364309 Version 1 (Component)Human ER LBD
pbpGBO_32153 Version 1 (Component) BBa_K1321090BBa_K1321090 Version 1 (Component)Phytochelatin (PC) EC20 + Linker-dCBD
pbpIBO_32101 Version 1 (Component) PbpBBO_26352 Version 1 (Component) pbpBBO_28623 Version 1 (Component) pbpDBO_29032 Version 1 (Component) PbpDBO_10922 Version 1 (Component) PbpGBO_11135 Version 1 (Component) BBa_K1979010BBa_K1979010 Version 1 (Component)Promoter (BBa_J23101)+PBP5+T7 terminator
PbpXBO_9381 Version 1 (Component) pbpXBO_28855 Version 1 (Component) PbpFBO_9064 Version 1 (Component) pbpEBO_32085 Version 1 (Component) PbpEBO_11036 Version 1 (Component) pbpFBO_31344 Version 1 (Component) PbpHBO_9265 Version 1 (Component) BBa_K1393001BBa_K1393001 Version 1 (Component)OprF(Ala196)+CBP
pbpEBO_3418 Version 1 (Component) BBa_K364329BBa_K364329 Version 1 (Component)ER DBD-VDR hinge-ER LBD
CCBDBBa_M45405 Version 1 (Component)Human Fibronectin
pbpABO_30184 Version 1 (Component) pbpXBO_3456 Version 1 (Component) BBa_K626008BBa_K626008 Version 1 (Component)DBD designed for RARE in ADRB - EcR LBD
BBa_K626009BBa_K626009 Version 1 (Component)DBD designed for RARE in CD38 - EcR LBD
BBa_K909008BBa_K909008 Version 1 (Component)tetR-DBD-UVR8 fusion protein
pbpFBO_2857 Version 1 (Component)