SynBioHub

Public

GFP
GFP Version 1 (Unknown)
Organism: Cryptococcus neoformans serotype A H99S

Public

GFP_SBOLDesignerActivity
GFP_SBOLDesignerActivity Version 1 (Unknown)

Public

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

Public

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Public

GFP
BBa_E0040 Version 1 (Component)
green fluorescent protein derived from jellyfish Aequeora victoria wild-type GFP (SwissProt: P42212

Public

LacI
BBa_R0010 Version 1 (Component)
promoter (lacI regulated)

Public

lacI+pL
BBa_R0011 Version 1 (Component)
Promoter (lacI regulated, lambda pL hybrid)

Public

cI lam
BBa_R0051 Version 1 (Component)
promoter (lambda cI regulated)

Public

GFP report
BBa_E0240 Version 1 (Component)
GFP generator

Public

BBa_B0011
BBa_B0011 Version 1 (Component)
LuxICDABEG (+/-)

Public

ecfp
BBa_E0020 Version 1 (Component)
engineered cyan fluorescent protein derived from A. victoria GFP

Public

BBa_B0014
BBa_B0014 Version 1 (Component)
double terminator (B0012-B0011)

Public

BBa_J04450
BBa_J04450 Version 1 (Component)
RFP Coding Device

Public

YFP
BBa_E0032 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

Public

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Public

BBa_E0430
BBa_E0430 Version 1 (Component)
EYFP (RBS+ LVA- TERM) (B0034.E0030.B0015)

Public

eyfp
BBa_E0030 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

Public

ECFP
BBa_E0022 Version 1 (Component)
enhanced cyan fluorescent protein derived from A. victoria GFP

Public

RhlR+C4
BBa_R0071 Version 1 (Component)
Promoter (RhlR & C4-HSL regulated)

Public

BBa_E0420
BBa_E0420 Version 1 (Component)
ECFP (RBS+ LVA- TERM) (B0034.E0020.B0015)

Public

SEGA021
SEGA021 Version 1 (Component)
natural linear DNA.

Public

GFP genera
BBa_E0840 Version 1 (Component)
GFP generator

Public

SEGA022
SEGA022 Version 1 (Component)
natural linear DNA.

Public

lacI
BBa_Q04121 Version 1 (Component)
QPI (B0034.C0012.B0015.R0011)

Public

BBa_E0422
BBa_E0422 Version 1 (Component)
ECFP (RBS+ LVA+ TERM) (B0034.E0022.B0015)

Public

BBa_I13401
BBa_I13401 Version 1 (Component)
GFP reporter for RHS of library test constructs

Public

BBa_Q04510
BBa_Q04510 Version 1 (Component)
QPI (B0034.C0051.B0015.R0051)

Public

mCherry
BBa_J06504 Version 1 (Component)
monomeric RFP optimized for bacteria

Public

BBa_R0010_sequence
BBa_R0010_sequence Version 1 (Sequence)

Public

BBa_Q01121
BBa_Q01121 Version 1 (Component)
QPI (B0031.C0012.B0015.R0011)

Public

BBa_B0024
BBa_B0024 Version 1 (Component)
double terminator (B0012-B0011), reversed

Public

BBa_J14452
BBa_J14452 Version 1 (Component)
CFP construct (R0011.E0420)

Public

BBa_I6031
BBa_I6031 Version 1 (Component)
Promoter O_H Test R0011.E0430

Public

ecfp
BBa_E0021 Version 1 (Component)
ECFP (RBS+ LVA-)

Public

BBa_S01002
BBa_S01002 Version 1 (Component)
R0071.E0422

Public

BBa_S03176
BBa_S03176 Version 1 (Component)
R0011.E0420.R0040.E0430

Public

BFP
BBa_K592100 Version 1 (Component)
Blue Fluorescent Protein (mTagBFP)

Public

RBS-RFP
BBa_K093005 Version 1 (Component)
RFP with RBS

Public

gfp_cassette
gfp_cassette Version 1 (Component)

Public

GFP
BBa_K145015 Version 1 (Component)
GFP with LVA tag

Public

BBa_J09855
BBa_J09855 Version 1 (Component)
Constitutive luxR device with pLuxR

Public

BBa_K823017
BBa_K823017 Version 1 (Component)
double terminator (B0012-B0011)

Public

BBa_I13023
BBa_I13023 Version 1 (Component)
QPI Test Construct Intermediate (Q01400.E0430)

Public

YFP
BBa_K592101 Version 1 (Component)
Yellow Fluorescent Protein (YFP)

Public

BBa_K208000
BBa_K208000 Version 1 (Component)
GFP

Public

BBa_K2066509
BBa_K2066509 Version 1 (Component)
sfGFP

Public

BBa_I6101
BBa_I6101 Version 1 (Component)
Promoter O_H Test R0071.E0430

Public

BBa_I6030
BBa_I6030 Version 1 (Component)
Promoter O_H Test R0010.E0430

Public

BBa_I746916
BBa_I746916 Version 1 (Component)
superfolder GFP coding sequence

Public

EYFP
BBa_E0034 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

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