SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
cI lamBBa_C0051 Version 1 (Component)cI repressor from E. coli phage lambda (+LVA)
cI lamBBa_R0051 Version 1 (Component)promoter (lambda cI regulated)
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
cI+luxRBBa_R0065 Version 1 (Component)Promoter (lambda cI and luxR regulated -- hybrid)
cI 434BBa_C0052 Version 1 (Component)cI repressor from phage 434 (+LVA)
BBa_K2066018BBa_K2066018 Version 1 (Component)UNS 2 Sequence, from Torella et al., 2013
cI 434BBa_R0052 Version 1 (Component)Promoter (434 cI regulated)
cI lamBBa_R1051 Version 1 (Component)Promoter, Standard (lambda cI regulated)<br>
cI HK022BBa_C0050 Version 1 (Component)cI repressor from phage HK022 (+LVA?)
BBa_P0451BBa_P0451 Version 1 (Component)PoPS -> cI (lambda) [S0153]
BBa_J52008BBa_J52008 Version 1 (Component)luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)
Prm +BBa_I12006 Version 1 (Component)Modified lamdba Prm promoter (repressed by 434 cI)
cIBBa_I9200 Version 1 (Component)cI lambda
cI HK022BBa_R0050 Version 1 (Component)Promoter (HK022 cI regulated)
cI TP901BBa_C0075 Version 1 (Component)TP901 cI repressor from phage TP901-1 (+LVA)
BBa_K228236BBa_K228236 Version 1 (Component)cI->Terminator
cIBBa_Q04511 Version 1 (Component)QPI (B0034.C0051.B0015.R0065)
BBa_P0455BBa_P0455 Version 1 (Component)RBS.Lambda cI LVA+.Term
BBa_P0151BBa_P0151 Version 1 (Component)PoPS -> cI (lambda) [S0165]
BBa_C0056BBa_C0056 Version 1 (Component)cI repressor from phage 434 (no LVA)
BBa_P0152BBa_P0152 Version 1 (Component)PoPS -> cI (434) [S0166]
cI TP901BBa_R0075 Version 1 (Component)Promoter (TP901 cI regulated)
SYFP2BBa_K864100 Version 1 (Component)Super Yellow Fluorescent Protein 2 (SYFP2)
BBa_K1114107BBa_K1114107 Version 1 (Component)Bicistronic Design RBS 2, MoClo Format with BC fusion sites
cI 434BBa_R1052 Version 1 (Component)Promoter, Standard (434 cI regulated)<br>
pLac+cIBBa_I763005 Version 1 (Component)cI repressor (+LVA) regulated by pLac Promoter
cI HK022BBa_R1050 Version 1 (Component)Promoter, Standard (HK022 cI regulated) <br>
BBa_J34807BBa_J34807 Version 1 (Component)Ci repressor fusion 2
BBa_I1023BBa_I1023 Version 1 (Component)CI(2) IS10 asRNA
BBa_I1063BBa_I1063 Version 1 (Component)CI(2) IS10 asRNA
BBa_K117002BBa_K117002 Version 1 (Component)LsrA promoter (indirectly activated by AI-2)
BBa_K1763442BBa_K1763442 Version 1 (Component)MaSp1/2[1:2]-12(1C3)
BBa_K1763438BBa_K1763438 Version 1 (Component)MaSp1/2[2:1]-12(1C3)
BBa_K091171BBa_K091171 Version 1 (Component)pBAD+RBS+cI+TT
pLambda+RFBBa_I763007 Version 1 (Component)promoter lambda (cI regulated) with RFP reporter
BBa_K081013BBa_K081013 Version 1 (Component)RBS - cI - RBS
BBa_I1020BBa_I1020 Version 1 (Component)Custom cI(2) Protein w/LacO-1 Promoter
BBa_K176107BBa_K176107 Version 1 (Component)CI Inverter + GFP Reporter: PoPS->cI-LVA+pCI->GFP
cI tsBBa_J06502 Version 1 (Component)Lambda cI857 (E07700) (RBS- LVA+)
BBa_K415000BBa_K415000 Version 1 (Component)pLux/cI-OR : RBS-mCherry : Term
BBa_K079019BBa_K079019 Version 1 (Component)Lac 2 - operator library member
cI lamBBa_I9201 Version 1 (Component)lambda cI operator/binding site
BBa_I1041BBa_I1041 Version 1 (Component)CI(2) "KISS" asRNA
BBa_I1042BBa_I1042 Version 1 (Component)CI(2) "micRNA" asRNA